[Biopython] Polypeptide.is_aa of GDP = True?

João Rodrigues j.p.g.l.m.rodrigues at gmail.com
Tue Jul 17 21:58:42 UTC 2018


Hi there,

Have a look at the documentation of that method. There is a 'standard'
optional argument that allows you to control just that.

http://biopython.org/DIST/docs/api/Bio.PDB.Polypeptide-module.html

Cheers,

João

A terça, 17/07/2018, 21:41, Ahmad Khalifa <underoath006 at gmail.com> escreveu:

> Hello,
>
> I have the following code:
>
> from Bio.PDB import Polypeptide
>
> residue
> Out[17]: <Residue GDP het=H_GDP resseq=430 icode= >
>
> Polypeptide.is_aa(residue)
> Out[18]: True
>
> Why is it True? How can I return True just for standard amino acids?
>
> Regards.
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> Biopython mailing list  -  Biopython at mailman.open-bio.org
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