[BioPython] os.system problem with clustalw (on Windows)
Peter
biopython at maubp.freeserve.co.uk
Thu Jul 26 15:57:26 UTC 2007
Emanuel Hey wrote:
> Peter
>
> both of these now work.
>
> faa_filename = 'data.faa'
> cline = MultipleAlignCL(faa_filename)
> align = do_alignment(cline)
>
> faa_filename =
> 'C:\\temp\\pythonplay\\hcgplay\\data.faa'
> cline = MultipleAlignCL(faa_filename)
> align = do_alignment(cline)
>
> Thanks!
>
> jhey
Oh good :)
Have you tried file names and/or paths with spaces in them?
Peter
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