[BioPython] aligning with clustalw fails
Gregory Singer
singerg at tcd.ie
Fri Dec 12 12:48:26 EST 2003
I replied to Karin personally about this, but I suppose I should have sent my
message to the whole list. In any case, the problem can easily be fixed:
Update the regex in line 31 of Bio/Clustalw/clustal_format.py to:
Martel.Re("[-a-zA-Z:;^_'\",\#\|\[\]\(\)\/\.\d\+]+"))
- Greg
Quoting Iddo Friedberg <idoerg at burnham.org>:
> Karin,
>
> When I removed the "+" character on the first anoatation line,
> everything seemed to work fine. The "+" sign must be confusing Martel in
> some way. Needs to be fixed. Good catch, thanks!!
>
> Iddo
>
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