[Biopython-dev] Changing run_tests.py (Galaxy package inspired)
vincent at vincentdavis.net
Fri May 13 15:44:44 UTC 2016
I think it would be nice if all the external dependency checks were in an
external module that could be used by a user.
A user might what to;
- Make sure Biopython can find the external app and help diagnose
- Check which version of the external app Biopython is using
- Might help with "modular installation"
On Thu, May 12, 2016 at 2:15 PM, Tiago Rodrigues Antao <tra at popgen.net>
> Regarding free vs non-free dependencies, I would suggest marking
> dependencies without a license as non-free.
> On Tue, 10 May 2016, Tiago Rodrigues Antao wrote:
>> On Tue, 10 May 2016, Peter Cock wrote:
>> I like this idea - I guess we'd need a subclass of the missing dependency
>>> exception specifically for missing a proprietary extension?
>> That would work.
>> Also, change run_tests and add two options, say:
>> I can work on a PR along these lines...
>> Biopython-dev mailing list
>> Biopython-dev at mailman.open-bio.org
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