[Biopython-dev] [Biopython (old issues only) - Bug #3212] (Closed) Enhancement for Bio.SeqUtils.MeltingTemp

[redmine at redmine.open-bio.org]

Issue #3212 has been updated by Markus Piotrowski.

Status changed from New to Closed
Target version set to Not Applicable
% Done changed from 0 to 100

This PR has become obsolete with the merge of the re-written MeltingTemp module (PR #192) https://github.com/biopython/biopython/pull/192) in Biopython 1.65. The actual module has more features and is more flexible than the Tm function proposed above.

----------------------------------------
Bug #3212: Enhancement for Bio.SeqUtils.MeltingTemp
https://redmine.open-bio.org/issues/3212#change-15289

* Author: ogan abaan
* Status: Closed
* Priority: Normal
* Assignee: Biopython Dev Mailing List
* Category: Main Distribution
* Target version: Not Applicable
* URL: 
----------------------------------------
Sorry, this is a repost. This was my first post and I realized that I left may things out. I couldn't update it or delete it sorry. 

Peter suggested that I post this here so you all can comment. 

I have created this Tm function with NN thermodynamics corrected for dna, Monovalent ions, Mg, dNTP, DMSO concentrations as published in the literature. Please feel free to provide your feedback. This function might be useful in Biopython.

---Files--------------------------------
tm.py (5.49 KB)


-- 
You have received this notification because you have either subscribed to it, or are involved in it.
To change your notification preferences, please click here and login: http://redmine.open-bio.org
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.open-bio.org/pipermail/biopython-dev/attachments/20160721/ee86b469/attachment.html>