<html>
<head>
<style>
body {
font-family: Verdana, sans-serif;
font-size: 0.8em;
color:#484848;
}
h1, h2, h3 { font-family: "Trebuchet MS", Verdana, sans-serif; margin: 0px; }
h1 { font-size: 1.2em; }
h2, h3 { font-size: 1.1em; }
a, a:link, a:visited { color: #2A5685;}
a:hover, a:active { color: #c61a1a; }
a.wiki-anchor { display: none; }
fieldset.attachments {border-width: 1px 0 0 0;}
hr {
width: 100%;
height: 1px;
background: #ccc;
border: 0;
}
span.footer {
font-size: 0.8em;
font-style: italic;
}
</style>
</head>
<body>
Issue #3212 has been updated by Markus Piotrowski.
<ul>
<li><strong>Status</strong> changed from <i>New</i> to <i>Closed</i></li>
<li><strong>Target version</strong> set to <i>Not Applicable</i></li>
<li><strong>% Done</strong> changed from <i>0</i> to <i>100</i></li>
</ul>
<p>This PR has become obsolete with the merge of the re-written MeltingTemp module (PR <a class="issue tracker-1 status-5 priority-7 priority-highest closed" title="Odd number of elements in hash list at Bio/Root/Object.pm line 515. (Closed)" href="https://redmine.open-bio.org/issues/192">#192</a>) <a class="external" href="https://github.com/biopython/biopython/pull/192">https://github.com/biopython/biopython/pull/192</a>) in Biopython 1.65. The actual module has more features and is more flexible than the Tm function proposed above.</p>
<hr />
<h1><a href="https://redmine.open-bio.org/issues/3212#change-15289">Bug #3212: Enhancement for Bio.SeqUtils.MeltingTemp</a></h1>
<ul><li>Author: ogan abaan</li>
<li>Status: Closed</li>
<li>Priority: Normal</li>
<li>Assignee: Biopython Dev Mailing List</li>
<li>Category: Main Distribution</li>
<li>Target version: Not Applicable</li>
<li>URL: </li></ul>
<p>Sorry, this is a repost. This was my first post and I realized that I left may things out. I couldn't update it or delete it sorry.</p>
<p>Peter suggested that I post this here so you all can comment.</p>
<p>I have created this Tm function with NN thermodynamics corrected for dna, Monovalent ions, Mg, dNTP, DMSO concentrations as published in the literature. Please feel free to provide your feedback. This function might be useful in Biopython.</p>
<fieldset class="attachments"><legend>Files</legend>
<a href="https://redmine.open-bio.org/attachments/download/1589/tm.py">tm.py</a>
(5.49 KB)<br />
</fieldset>
<hr />
<span class="footer"><p>You have received this notification because you have either subscribed to it, or are involved in it.<br />To change your notification preferences, please click here and login: <a class="external" href="http://redmine.open-bio.org">http://redmine.open-bio.org</a></p></span>
</body>
</html>