[Biopython-dev] Blast XML Parse Improvements

Travis Wrightsman twrig002 at ucr.edu
Wed Jul 29 05:12:38 UTC 2015


Biopython Devs,

I was trying to parse through a tblastn XML output with multiple queries in
the query file and it was generating a BLAST record object for each contig
in the subject file instead of each run. Is this the intended behavior or
has this not been updated for ncbi tools 2.2.30?

If it needs to be updated or finished, I'm more than happy to rewrite or
update some of the code in NCBIXML for the latest version.

-Travis
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