[Biopython-dev] Releasing Biopython 1.62 this week?

Peter Cock p.j.a.cock at googlemail.com
Tue Aug 27 08:43:17 UTC 2013

Continuing this thread under a new title, as below, I would
like to do the Biopython 1.62 release in the next day or two:



On Tue, Aug 27, 2013 at 9:41 AM, Peter Cock wrote:
> On Mon, Aug 26, 2013 at 5:04 PM, Wibowo Arindrarto wrote:
>>> So you'd be comfortable with removing the experimental warning
>>> for SearchIO in Biopython 1.62 final (this week if the PDB occupancy
>>> thing is resolved)?
>> Yes. I think all public-facing modules are ok now. There are still two
>> issue which I consider minor, but I think should be mentioned before
>> we lift the warning:
>> ...
>> Other than these, some planned features are implementing the HMMER3.1
>> parser (which I think should not interfere with lifting the warning).
> We'll also want to update the Tutorial as well, merging the BLAST
> and SearchIO chapters. Let's start work on this just after releasing
> Biopython 1.62 then, which I think we can now go ahead with :)
> Lenna has sorted out the PDB occupancy issue, and Eric has
> updated the PRANK unit tests.
> I think this means we are OK to do the release in the next day
> or two? Any objections?
> Regards,
> Peter

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