[Biopython-dev] [Patch] Genbank Parser

Björn Grüning bjoern at gruenings.eu
Fri Sep 28 13:03:22 UTC 2012


Hi,

the tbl2asn tool from the ncbi creates genbank files that did not have a
version number. Unfortunately that version number is used to fill
consumer.data.id. 
I implemented the following fall-back:
If there is no version information available than it takes the
consumer.data.name for the consumer.data.id. Does that makes sense?

Thanks!
Bjoern

-------------- next part --------------
A non-text attachment was scrubbed...
Name: biopython_genbank_id-fallback.diff
Type: text/x-patch
Size: 1016 bytes
Desc: not available
URL: <http://lists.open-bio.org/pipermail/biopython-dev/attachments/20120928/8f4fe694/attachment-0002.bin>


More information about the Biopython-dev mailing list