[Biopython-dev] Bio.PDB.Structure tests added

Peter biopython at maubp.freeserve.co.uk
Wed Dec 22 10:46:54 UTC 2010


On Wed, Dec 22, 2010 at 10:37 AM, Kristian Rother <krother at rubor.de> wrote:
>
> Hi,
>
> I was just running tests on the functions get_chains, get_residues, and
> get_atoms in Bio.PDB.Structure. It all seemed fine, and I decided to
> create a branch with test functions, because I didn't find any so far.
>
> (the testing included manually counting through the atoms. I recognized
> that there are some specific rules how insertion codes are interpreted
> (e.g. always takes the second residue), but they seemed consistent to me.
>
> see also:
> https://github.com/krother/biopython/commits/bugfix_getresidue
>
> https://github.com/krother/biopython/commit/2609230e5f661abf0d0ca1aa9f0e8592bc2141c7
>
> Best regards,
>    Kristian

Cherry-picked, thanks.

Peter




More information about the Biopython-dev mailing list