[Biopython-dev] sff reader

Peter biopython at maubp.freeserve.co.uk
Sat May 23 11:28:36 UTC 2009

On Sat, May 23, 2009 at 2:48 AM, Senthil Palanisami <spenthil at gmail.com> wrote:
> Sorry, I only recently joined this list - should have gone through the
> archives first.

Don't worry - and if I sounded grumpy, sorry - I was up late last night.

> I have done some minimal SFF tweaking, but only by first converting them
> to CA format.

What do you mean by CA format? I don't recall seeing that abbreviation

> No paired end reads yet, but I do know my PI wants me to start looking
> at some in the next month or two.

I haven't had any paired end 454 reads to work with personally, but I'm
sure there are some examples available online somewhere.


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