[Biopython-dev] [Bug 1816] Error when importing GenBank file into BioSQL database

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Mar 14 16:06:44 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=1816





------- Comment #8 from lpritc at scri.sari.ac.uk  2007-03-14 12:06 EST -------
> I'm guessing that you are refering to the change two years ago in
> biopython/BioSQL/Loader.py (revision 1.16)

I think Marc's improving on my workaround to Loader.py (rev 1.17) and taking an
alternative approach to my fix to DBUtils.py.  The test_BioSQL.py script in CVS
still fails though, due to an unrelated issue of the return string format for
locations, and I still need to issue server.adaptor.commit() in MySQL5.


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