[Biopython-dev] test_Cluster.py fails

Peter biopython-dev at maubp.freeserve.co.uk
Wed Feb 28 18:05:20 UTC 2007

Michiel Jan Laurens de Hoon wrote:
> Peter wrote:
>>>> The bad news is that test_Cluster fails (full details below) with
>>>> cluster.error: kcluster: nclusters should be positive
>>> Does this happen to be a 64-bits Linux box? One user with a 64-bits 
>>> machine had this problem before. I have a fix for it, but it's not in 
>>> CVS yet.
>> Yes, this is a 64-bit Linux box.  Is there a simple patch I could test?
> I have updated Bio.Cluster and the corresponding tests in CVS now. Could 
> you try this new code and see if the problem is solved on the 64-bits 
> machines?

Updated to CVS, and test_Cluster.py now passes on my 64-bit Linux 
machine.  I have not attempted any further testing of the module.

Thank you :)


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