[Biopython-dev] test_Cluster.py fails

Michiel Jan Laurens de Hoon mdehoon at c2b2.columbia.edu
Tue Feb 27 18:26:10 UTC 2007

Peter wrote:
>>> The bad news is that test_Cluster fails (full details below) with
>>> cluster.error: kcluster: nclusters should be positive
>> Does this happen to be a 64-bits Linux box? One user with a 64-bits 
>> machine had this problem before. I have a fix for it, but it's not in 
>> CVS yet.
> Yes, this is a 64-bit Linux box.  Is there a simple patch I could test?
I have updated Bio.Cluster and the corresponding tests in CVS now. Could 
you try this new code and see if the problem is solved on the 64-bits 



Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1130 St Nicholas Avenue
New York, NY 10032

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