[Biopython-dev] Missing files in Biopython 1.22

Jeffrey Chang jchang at jeffchang.com
Tue Oct 14 23:42:33 EDT 2003

Yes, they were missing.  I've fixed the MANIFEST.in file so that they 
will be included in the next release.  I'll roll a 1.23 release this 


On Tuesday, October 14, 2003, at 10:45  AM, Michiel Jan Laurens de Hoon 

> Dear Biopythoneers,
> This evening I set out to create the Windows installers for Biopython 
> 1.22. The good news is that there were no compilation errors. The bad 
> news is that the __init__.py and data.py files are missing from 
> Bio/Cluster in the Biopython 1.22 source distribution. I checked in 
> CVS, and found them there. Can these two files be added to the 
> Biopython 1.22 package?
> I then added the __init__.py and data.py files from CVS, and made the 
> Windows installers. You can find them at
> http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/biopython-1.22.win32-py2.2.exe
> http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/biopython-1.22.win32-py2.3.exe
> (I will remove these once they are available from the Biopython site). 
> While I was at it, I also made a complete Biopython 1.22 distribution:
> http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/biopython-1.22.tar.gz
> There was one more warning message that I got when compiling Biopython:
> Bio/trie.c: In function `Trie_has_prefix':
> Bio/trie.c:443: warning: return makes integer from pointer without a 
> cast
> As far I can tell from trie.c, this warning is not serious, it is due 
> to returning a NULL instead of a 0 where the return type is int. But 
> we may as well fix it.
> --Michiel.
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