[Biopython-dev] rolling release tonight!

Brad Chapman chapmanb at arches.uga.edu
Mon Dec 17 16:35:47 EST 2001


Hey Jeff;

> The regression tests seem to be working, with the exception of the
> test_GraphicsXXX ones that are failing on my system because I don't
> have reportlab installed.  I think the proper way to fix this is to
> skip tests on systems that don't have the required components
> installed.  Unless someone wants to implement this today, I'm going to
> let this slide for this release, and put a note about it in the README
> file.

Okee dokee, I coded this in. There really isn't any skip support in
pyunit (which appears to be a deliberate design decision), so now
things look like this when there is an import problem:

[...]
test_GenBankFormat ... ok
test_GraphicsChromosome ... Skipping test because of import error:
No module named reportlab.pdfgen
ok
test_GraphicsDistribution ... Skipping test because of import error:
No module named reportlab.pdfgen
ok
test_GraphicsGeneral ... Skipping test because of import error: No
module named reportlab.pdfgen
ok
test_HMMCasino ... ok
[...]

Hopefully this works okay for ya. No major error, but at least some
notice of skipping the test.

> I'm going to build this release tonight, unless I get a red flag from
> someone.  If everything goes right, we'll have a shiny new biopython
> in the morning!

Sweet!

Giving-biopython-to-all-my-relatives-for-Christmas-ly yr's,
Brad
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