[Bioperl-l] free software to estimate dS and dN in pairwise comparisons

Carnë Draug carandraug+dev at gmail.com
Tue Jan 10 20:19:21 UTC 2017

I am looking for a piece of free software to estimate synonymous and
non-synonymous (dS and dN) distances between aligned sequences.

I have found codeml on Bio::Tools::Run::Phylo::PAML::Codeml but that
is not free software (it's for academic use only).  Can anyone suggest
an alternative?

Thank you

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