[Bioperl-l] warnings for Bio::Range

Fields, Christopher J cjfields at illinois.edu
Tue Mar 18 12:47:30 UTC 2014


The latest on CPAN is v 1.6.923.  Can you try that?  This was a warning added in perl 5.12 or 5.14 (I think), but it doesn’t cause any problems.  IIRC the problem was that the replacement list in a transliteration had one extra character at the end.

chris

On Mar 18, 2014, at 3:56 AM, Athina Theodosiou <athitheo at gmail.com<mailto:athitheo at gmail.com>> wrote:

the version:
bioperl 1.6.901-2

thanks
Athina


On 17 March 2014 19:41, Fields, Christopher J <cjfields at illinois.edu<mailto:cjfields at illinois.edu>> wrote:
This is an old problem that has been addressed.  Can you tell us what version of bioperl you are using?

chris

On Feb 19, 2014, at 8:11 AM, Athina Theodosiou <athitheo at gmail.com<mailto:athitheo at gmail.com>> wrote:

> Hello there,
>
> I have just installed Bioperl in Upuntu 12.04 LTS (the installation was
> done through the upuntu software center) therfore automatically. I keep
> getting a warning error when runing perl scripts:
> Replacement list is longer than search list at
> /usr/local/share/perl/5.14.2/Bio/Range.pm line 238.
> Is this a perl release problem a bioperl problem?
>
> Thanks in advance
> Athina Theodosiou
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