[Bioperl-l] length of hit->description

Fields, Christopher J cjfields at illinois.edu
Thu Jul 24 17:48:20 UTC 2014

You’ll have to be more explicit.  What is the analysis (BLAST, FASTA, BLAT, etc)?  What is the expected result?  

Most of the above parsers will take the hit name as the first set of non-whitespace characters, and anything after that is put into the description.


On Jul 24, 2014, at 12:04 PM, Antony03 <antony.vincent.1 at ulaval.ca> wrote:

> Hello,
> When I use hit->description I get a truncated result like this:
> repB putative plasmid replication protein R
> I tried hit->description(500) and I get the same result.
> Is there something wrong?
> Thanks
> --
> View this message in context: http://bioperl.996286.n3.nabble.com/length-of-hit-description-tp17596.html
> Sent from the Bioperl-L mailing list archive at Nabble.com.
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at mailman.open-bio.org
> http://mailman.open-bio.org/mailman/listinfo/bioperl-l

More information about the Bioperl-l mailing list