[Bioperl-l] BioPerl question

Brian Osborne briano at bioteam.net
Tue Jul 1 14:53:45 UTC 2014


The script is bioperl-live/scripts/DB/bp_bioflat_index.pl

Brian O.

On Jul 1, 2014, at 10:43 AM, llwang <wangliangkexue at 163.com> wrote:

> Dear Briano,
> 	I am learning bioperl at the time. but in the section Bio::DB::Flat module, I want to build a local database, then I can not find the perl script bioflat_index.pl in the path Bio/DB, or any other path. I only found /usr/local/bin/bp_index.pl, is this script is the same script as bioflat_index.pl? So, I need your help please.
> Thank you very much for your help
> 	For another question, such as genbank, I would got a local database from genbank and keep incremental update, then how i maintenance the index of incremental database?
> Best wishes
> from kiang

Brian O.
Brian Osborne, PhD
BioTeam: http://bioteam.net
email: briano at bioteam.net
mobile: 978-317-3101

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