Please read the documentation for Bio::Tools::Run::StandAloneBlast and Bio::AlignIO.* * On Mon, Sep 12, 2011 at 1:58 PM, Manju Rawat <manju.rawat2 at gmail.com> wrote: > Ya i know this....And it is also in my use if i get result with lower > scores. > But how could I do this? > > > Manju >