[Bioperl-l] cpan indexing
Robert Buels
rmb32 at cornell.edu
Wed May 18 23:57:07 UTC 2011
So,
rob at nightshade ~$ cpanm Bio::PrimarySeq
--> Working on Bio::PrimarySeq
Fetching
http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.1.tar.gz ...
What? 1.6.1? That's not right.
Looking in
http://search.cpan.org/CPAN/modules/02packages.details.txt.gz, we see
things like:
Bio::Align::AlignI 1.006001 BioPerl-1.6.1.tar.gz
Bio::Align::DNAStatistics 1.006001 BioPerl-1.6.1.tar.gz
Bio::Align::Graphics 0 BioPerl-1.6.900.tar.gz
Bio::Align::PairwiseStatistics 1.006001 BioPerl-1.6.1.tar.gz
Bio::Align::ProteinStatistics 1.006001 BioPerl-1.6.1.tar.gz
Bio::Align::StatisticsI 1.006001 BioPerl-1.6.1.tar.gz
It looks like 1.6.1 was uploaded with $VERSION of every module, while
1.6.9 was not (thus the 0 version numbers). Thus, for all but the
omodules that were added in 1.6.9, 1.6.1 is being treated by the CPAN
indexer as the most recent distribution.
This probably calls for another release, 1.6.910 or something, with
$VERSION in each file. :-(
Rob
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