[Bioperl-l] Mapping GO slim terms

[Lorenzo Carretero Paulet]

Jason,
Thank you very much. I'll take a look at that module.
Lorenzo

El 29/06/11 07:38, Jason Stajich escribió:
> Lorenzo -
>
> you probably want to look at the GO-perl modules from Chris Mungall  and others (http://search.cpan.org/~cmungall/go-perl/) -- these are not part of BioPerl however.
>
> I think this script does something akin to what you are asking.
> http://search.cpan.org/~cmungall/go-perl/scripts/map2slim
>
> On Jun 23, 2011, at 11:17 AM, Lorenzo Carretero Paulet wrote:
>
>> Hi all,
>> Anyone knows if there is a way of mapping a set fo GO terms to their GO slim terms (providing the corresponding OBO file) using Bioperl?
>> Cheers,
>> Lorenzo
>>
>>
>> -- 
>> *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
>> Lorenzo Carretero Paulet
>> Institute for Plant Molecular and Cell Biology - IBMCP (CSIC-UPV)
>> Integrative Systems Biology Group
>> C/ Ingeniero Fausto Elio s/n.
>> 46022 Valencia, Spain
>>
>> Phone:  +34 963879934
>> Fax:    +34 963877859
>> e-mail: locarpau at upvnet.upv.es
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>>
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-- 
*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
Lorenzo Carretero Paulet
Institute for Plant Molecular and Cell Biology - IBMCP (CSIC-UPV)
Integrative Systems Biology Group
C/ Ingeniero Fausto Elio s/n.
46022 Valencia, Spain

Phone:  +34 963879934
Fax:    +34 963877859
e-mail: locarpau at upvnet.upv.es
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