[Bioperl-l] Perl

Adam Witney awitney at sgul.ac.uk
Thu Jul 21 12:24:54 UTC 2011


On 21 Jul 2011, at 12:50, Akash wrote:
> I am a student of University of Exeter and doing my master's in
> Bioinformatics. I am working on perl and here I need to input the "fasta"
> file in perl and then I have to remove the contigs which have more than
> "200" base pairs.
> 
> So can you help me how to do this?

take a look at Bio::SeqIO

http://search.cpan.org/~cjfields/BioPerl-1.6.901/Bio/SeqIO.pm

regards

adam



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