[Bioperl-l] questions on analysising clustalw alignment result files

[Peter Cock]

On Tue, Jul 5, 2011 at 3:45 PM, Chris Fields <cjfields at illinois.edu> wrote:
>
> The best thing to do in this case is to file a bug for tracking
> (might be a good thing to have cross-lang bugs in this case, maybe?).
> Anyway, it's very likely as Peter says, the parser is choking on something
> and doesn't recognize the file.
>
> chris

Good plan Chris.

Tao, please goto http://redmine.open-bio.org/projects/bioperl to file
a bug. As well as the example output file from your original email,
could you also include the input file for the alignment, and the
clustalw2 command line used to create it?

Thanks,

Peter