[Bioperl-l] Bug in a simple bioperl graphics program

[Lincoln Stein]

Sorry about the bug. It is fixed in Bio::Graphics version 2.21, which should
be appearing on CPAN within the day.

Lincoln

On Tue, Apr 12, 2011 at 8:15 AM, Richard Harrison <
richard.harrison at edinburgh.ac.uk> wrote:

> Hi,
> I'm using bioperl-live (1.0069) and Bio-Graphics-2.20 and get this error :
>
> Can't locate object method "attributes" via package
> "Bio::SeqFeature::Generic" at
> /usr/local/share/perl/5.10.1/Bio/Graphics/Glyph.pm line 703, <COORD> line 7.
>
>
> when running a very simple script to print out a simple feature display
> (where some contigs are positioned on a larger reference sequence).
>
> Using bioperl 1.006 and some unknown version of bio-graphics ( i can't
> remember installing this separately) it works fine.
>
> Please let me know if you have any suggestions!
> All the best,
> Richard Harrison
> The University of Edinburgh is a charitable body, registered in
> Scotland, with registration number SC005336.
>
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>



-- 
Lincoln D. Stein
Director, Informatics and Biocomputing Platform
Ontario Institute for Cancer Research
101 College St., Suite 800
Toronto, ON, Canada M5G0A3
416 673-8514
Assistant: Renata Musa <Renata.Musa at oicr.on.ca>