[Bioperl-l] Installing Bioperl using CPAN on Suse 11.3
Dave Messina
David.Messina at sbc.su.se
Tue Sep 14 07:56:33 UTC 2010
Hi Tim,
Thanks for your report.
> Is Bioperl properly installed?
No, it wasn't. When installing through CPAN, if any tests fail the installation is aborted. You can always check by looking for this line:
> make test had returned bad status, won't install without force
As for the error(s)
> 'replacement list longer than search list'
I believe this was fixed a couple of months ago. For details, see:
http://bugzilla.open-bio.org/show_bug.cgi?id=3116
So I would recommend that you grab the latest copy of bioperl-live from github, wherein the bug will be fixed:
http://www.bioperl.org/wiki/Getting_BioPerl#Snapshots
Give that a shot and let us know how it goes.
Dave
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