[Bioperl-l] hmmer3/hmmscan parser

Kai Blin kai.blin at biotech.uni-tuebingen.de
Fri May 21 21:56:37 UTC 2010


Hi list, hi Thomas,

I've just bumped into the fact that bioperl-live still doesn't seem to
support the hmmer3 hmmscan output format (thanks for the help at
#bioperl). The nice folks on IRC pointed me at an email from Thomas
Sharpton, noting that he was already working on a parser for this. So I
thought I'd ask about the status of that before I run off writing my
own. Is there anything I can help with?

Cheers,
Kai

-- 
Dipl.-Inform. Kai Blin         kai.blin at biotech.uni-tuebingen.de
Interfakultäres Institut für Mikrobiologie und Infektionsmedizin
Abteilung Mikrobiologie/Biotechnologie
Eberhard-Karls-Universität Tübingen
Auf der Morgenstelle 28                 Phone : ++49 7071 29-78841
D-72076 Tübingen                        Fax :   ++49 7071 29-5979
Deutschland
Homepage: http://www.mikrobio.uni-tuebingen.de/ag_wohlleben




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