[Bioperl-l] Full bioperl-live github demo

[Chris Fields]

I like this:

http://github.com/bioperl/bioperl-test/graphs/impact

Kinda cool yet scary.

chris

On May 3, 2010, at 8:13 AM, Mark A. Jensen wrote:

> That's it-- the github site sez http, but that must be for a simple copy (however you do that...) I'm on github with
> majensen
> cheers Chris- MAJ
> ----- Original Message ----- From: "Chris Fields" <cjfields at illinois.edu>
> To: "Mark A. Jensen" <maj at fortinbras.us>
> Cc: "BioPerl List" <bioperl-l at lists.open-bio.org>
> Sent: Monday, May 03, 2010 9:07 AM
> Subject: Re: [Bioperl-l] Full bioperl-live github demo
> 
> 
> This worked for me (note the URL is git, not http; on Mac OS X 10.6, git 1.6.4.1):
> 
> cjfields$ git clone git://github.com/bioperl/bioperl-test.git
> Initialized empty Git repository in /Users/cjfields/gittest/bioperl-test/.git/
> remote: Counting objects: 86737, done.
> remote: Compressing objects: 100% (22309/22309), done.
> remote: Total 86737 (delta 64759), reused 85957 (delta 63979)
> Receiving objects: 100% (86737/86737), 143.24 MiB | 1536 KiB/s, done.
> Resolving deltas: 100% (64759/64759), done.
> 
> For dev access (ssh or https) we need to set up collaborators within the github bioperl account.  I'll add a few.  Do you have a github acct set up?
> 
> chris
> 
> On May 3, 2010, at 7:25 AM, Mark A. Jensen wrote:
> 
>> Hi Chris,
>> I attempted a clone and got the following. Is this my problem?
>> thanks MAJ
>> 
>> $ git clone http://github.com/bioperl/bioperl-test.git
>> 
>> Initialized empty Git repository in /...../bioperl/github/bioperl-test/.git/
>> Getting alternates list for http://github.com/bioperl/bioperl-test.git
>> Getting pack list for http://github.com/bioperl/bioperl-test.git
>> Getting index for pack 809561bb87edbf2bef183164ceb96cd6099ee06c
>> Getting index for pack 9530b04c1b4f494c2c9163775fdc00eab975caa6
>> Getting pack 809561bb87edbf2bef183164ceb96cd6099ee06c
>> which contains 5ac325fa636b50ca1163d79feceb00eff1fa738f
>> error: file /...../github/bioperl-test/.git/objects/pack/pack-809561bb87edbf2bef183164ceb96cd6099ee06c.pack is not a GIT packfile
>> fatal: packfile /...../github/bioperl-test/.git/objects/pack/pack809561bb87edbf2bef183164ceb96cd6099ee06c.pack cannot be accessed
>> 
>> 
>> ----- Original Message ----- From: "Chris Fields" <cjfields at illinois.edu>
>> To: "BioPerl List" <bioperl-l at lists.open-bio.org>
>> Sent: Monday, May 03, 2010 12:22 AM
>> Subject: [Bioperl-l] Full bioperl-live github demo
>> 
>> 
>>> All,
>>> 
>>> I have pushed a demo of the bioperl-live (all branches and tags) to github here:
>>> 
>>> http://github.com/bioperl/bioperl-test
>>> 
>>> This is separate from the 'bioperl-live' repo at the same github account for the time being.  The conversion was performed using svn2git (the gitorious C++/Qt version from the KDE project migration, Jonathan Leto's suggestion), using the rsync'ed svn repo via ssh from dev.open-bio.org, so an update and rerun can be performed very quickly.  The actual conversion of the entire bioperl repo took very little time, actually (less than 3 minutes).  I think, with some additional small work using the svn2git rules pretty much everything is ready for migration.
>>> 
>>> In this run, all subversion tags are converted to git tags (branches remain git branches as expected).  Just in case I'm missing something, I would like everyone to take a look at this, though.  In particular, I would like to make sure tags and branches are as they are expected.  So far I haven't seen anything that stands out as odd.
>>> 
>>> chris
>>> 
>>> 
>>> 
>>> _______________________________________________
>>> Bioperl-l mailing list
>>> Bioperl-l at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/bioperl-l
>>> 
>> 
>> _______________________________________________
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 
> 
> 
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l