[Bioperl-l] RE. installing BioPerl-run-1.6.1.tar.gz‏

Chris Fields cjfields at illinois.edu
Fri Jun 18 03:52:20 UTC 2010


Bio::Factory::EMBOSS is in BioPerl-Run (a separate package), not BioPerl.  You need to install that separately.

chris

On Jun 17, 2010, at 10:36 PM, Florent Angly wrote:

> Arthur,
> Please when replying, use 'reply all'.
> Describe exactly what OS you are using, what steps you performed to install BioPerl and the error messages you got.
> Thanks,
> Florent
> 
> On 18/06/10 12:40, Arthur Lin wrote:
>> Hi Florent
>> 
>> Thank you for your correspondence. I still have the same problem after I followed the instruction on installing_BioPerl and installed through cpan.
>> During the installation, I followed through the entire process with default option.
>> Have you encountered anyone who has similar problem?
>> 
>> Yours sincerely
>> Arthur
>> 
>> > Date: Fri, 18 Jun 2010 12:21:31 +1000
>> > From: florent.angly at gmail.com
>> > To: arthur11985 at hotmail.com
>> > CC: bioperl-l at bioperl.org
>> > Subject: Re: [Bioperl-l] RE. installing BioPerl-run-1.6.1.tar.gz‏
>> >
>> > Hi Arthur,
>> >
>> > The message is quite descriptive... BioPerl cannot be found on your
>> > computer. This obviously leads to the question: how did you install BioPerl?
>> > See this for details on installing BioPerl:
>> > http://www.bioperl.org/wiki/Installing_BioPerl
>> > Regards,
>> >
>> > Florent
>> >
>> >
>> 
>> 
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