[Bioperl-l] a possible issue in synopsis of BioPerl-1.6.1 > Bio::Restriction::Analysis
А
russkieknigi at mail.ru
Thu Jun 10 23:45:11 UTC 2010
Hi,
An attempt to run synopsis code as is results in the following runtime error:
Can't locate object method "unique_cutters" via package "Bio::Restriction::EnzymeCollection" at testrflp.pl line 21, <DATA> line 532.
Replacing this:
my $enzymes = $ra->unique_cutters;
print "Unique cutters: ", join (', ',
map {$_->name} $enzymes->unique_cutters), "\n";
with the following code:
my $enzymes=$ra->unique_cutters;
print "Unique cutters: ", join (', ',
map {$_->name} $enzymes->each_enzyme()), "\n"; #<<<<<<<<<<<< this line changed
results in an error message-free execution and the output appears reasonable
Cheers,
Alex
More information about the Bioperl-l
mailing list