[Bioperl-l] rebase file withrefm
Dave Messina
David.Messina at sbc.su.se
Thu Jun 3 17:45:19 UTC 2010
Hi Nick,
> Could someone please tell me where in a normal bioperl installation the
> rebase file withrefm downlaoded from NEB goes.
Are you talking about when using the (apparently undocumented) invocation of Bio::Restriction::IO to have BioPerl grab the latest rebase file itself via FTP?
i.e.
my $io = Bio::Restriction::IO->new('-format' => 'withrefm',
'-current' => 1);
If so, it's written to a temporary file via File::Temp, so the location is OS-dependent and determined at runtime.
If you're not talking about that, though, could you please clarify?
Dave
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