[Bioperl-l] Why I can't find the perl script "load_seqdatabase.pl" when use biosql database?

Michael Muratet mmuratet at hudsonalpha.org
Thu Aug 19 15:00:52 UTC 2010


On Aug 19, 2010, at 9:53 AM, Hilmar Lapp wrote:

> The file comes with Bioperl-db, not BioSQL. That is so because it  
> depends on BioPerl and on Bioperl-db, and so you will need to have  
> both installed.

Is load_seqdatabase.pl still the best method? I vaguely remember a  
post that said that load_seqdatabase was deprecated, but I can't find  
it in the archives.

Mike

>
> 	-hilmar
>
> On Aug 19, 2010, at 4:02 AM, xupeng wrote:
>
>> 	I've downloaded the biosql-1.0.1.tar.gz. It works well. But I
>> can't find the 'load_seqdatabase.pl' when I try to import the
>> Genbank files into biosql databsase.
>> 	Can anyone give me a copy of that file?
>> many thanks !
>> _______________________________________________
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>> Bioperl-l at lists.open-bio.org
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>
> -- 
> ===========================================================
> : Hilmar Lapp -:- Durham, NC -:- hlapp at drycafe dot net :
> ===========================================================
>
>
>
>
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Michael Muratet, Ph.D.
Senior Scientist
HudsonAlpha Institute for Biotechnology
mmuratet at hudsonalpha.org
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(256) 327-0966 (f)

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