[Bioperl-l] MUMmer parser work

John SJ Anderson genehack at genehack.org
Mon Aug 9 01:42:27 UTC 2010


I'm working on getting those files into a topic branch in bioperl-live so they can be reviewed -- that'll probably be pushed back to the main master within the next couple days at the latest. 

j.

On Aug 8, 2010, at 20:53 , Dan Kortschak wrote:

> Hi Chris,
> 
> Is that set of files planned to be included in the git repository on
> bioperl-live? I don't want to push something that is being organised by
> someone else.
> 
> cheers
> Dan
> 
> On Thu, 2010-08-05 at 22:13 -0500, Chris Fields wrote:
>> Dan,
>> 
>> Just so you know, there is a proposed MUMmer AlignIO parser that John (genehack) is planning on trying to incorporate in:
>> 
>> http://bugzilla.open-bio.org/show_bug.cgi?id=2701
>> 
>> It currently lacks significant tests, so feel free to chip in there as needed.
>> 
>> chris
> 
> 
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