[Bioperl-l] Wrapper for Picard tools in Bioperl

Chris Fields cjfields at illinois.edu
Thu Aug 5 23:10:16 UTC 2010


Picard uses samtools, which has a perl API:

http://search.cpan.org/dist/Bio-SamTools/

which uses BioPerl.  Ah, the circle of life...

chris

On Aug 5, 2010, at 5:15 PM, Abhishek Pratap wrote:

> Hi All
> 
> Just wondering if there is any Picard wrapper/s available in Bioperl.
> 
> 
> Thanks!
> -Abhi
> 
> -----------------------------
> Abhishek Pratap
> Bioinformatics Software Engineer II
> Genomics Resource Center
> Institute for Genome Sciences
> School of Medicine, Univ of Maryland
> 801, W. Baltimore Street, Baltimore, MD 21209
> Ph: (+1)-410-706-2296
> www.igs.umaryland.edu/
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