[Bioperl-l] bioperl-pipeline?

[Hilmar Lapp]

biopipe.org is dead. I don't know whether that extends then to bioperl- 
pipeline, but quite possibly so.

Biomoby is alive (if possibly in hibernation) AFAIAA. Maybe if we all  
collectively yell "Mark" he'll wake up and say something.

	-hilmar

On Jan 28, 2009, at 11:28 AM, Chris Fields wrote:

> I know many have moved to Taverna, yes.  There were some notes on  
> the wiki about possibly getting bioperl-pipeline working with  
> Taverna but (as you have noted) no one has progressed along those  
> lines.
>
> chris
>
> On Jan 28, 2009, at 4:39 AM, Giovanni Marco Dall'Olio wrote:
>
>> On Wed, Jan 28, 2009 at 11:16 AM, Heikki Lehvaslaiho
>> <heikki.lehvaslaiho at gmail.com> wrote:
>>> Could someone give an update on the current status of
>>> bioperl-pipeline/biopipe project?
>>
>> There are many other tools you can use to create pipelines.
>> For example, make and any derived tool
>> - http://swc.scipy.org/lec/build.html
>> - http://www.nodalpoint.org/2007/03/18/a_pipeline_is_a_makefile
>>
>> or, I have been told well of kepler:
>> - http://en.wikipedia.org/wiki/Kepler_scientific_workflow_system
>>
>> Hope it can help you.
>>
>>> It seems to have been quiet for a long time. Incidentally, same  
>>> seems
>>> to apply on BioMoby project.
>>>
>>> It is sort of shame, because a lot of good can be said of the aims  
>>> of
>>> both projects.
>>>
>>> Is there something generic that I just have not heard off or is it
>>> Taverna/Grid that has taken over.
>>>
>>> -Heikki
>>> _______________________________________________
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>>> Bioperl-l at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/bioperl-l
>>>
>>
>>
>>
>> -- 
>>
>> My blog on bioinformatics (now in English): http://bioinfoblog.it
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>
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-- 
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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