[Bioperl-l] bioperl-pipeline?

Giovanni Marco Dall'Olio dalloliogm at gmail.com
Wed Jan 28 10:39:59 UTC 2009

On Wed, Jan 28, 2009 at 11:16 AM, Heikki Lehvaslaiho
<heikki.lehvaslaiho at gmail.com> wrote:
> Could someone give an update on the current status of
> bioperl-pipeline/biopipe project?

There are many other tools you can use to create pipelines.
For example, make and any derived tool
- http://swc.scipy.org/lec/build.html
- http://www.nodalpoint.org/2007/03/18/a_pipeline_is_a_makefile

or, I have been told well of kepler:
- http://en.wikipedia.org/wiki/Kepler_scientific_workflow_system

Hope it can help you.

> It seems to have been quiet for a long time. Incidentally, same seems
> to apply on BioMoby project.
> It is sort of shame, because a lot of good can be said of the aims of
> both projects.
> Is there something generic that I just have not heard off or is it
> Taverna/Grid that has taken over.
>   -Heikki
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