[Bioperl-l] Help: How to output the
Jason Stajich
jason at bioperl.org
Fri Jan 23 17:20:49 UTC 2009
Wen-Zhi -
I strongly encourage you to use it for these types of general questions.
There are several options available to the seq_inds methods which
allows you to choose query or subject and the type of sequence
matching: identical, conserved, nomatch, gap
For DNA identical and conserved will be the same result.
You can get the coordinates in either query or hit coordinates with
the 1st argument - there has been some improvements to this code since
1.5 series so I would encourage you to get the 1.6 release that is
alpha stage of release.
Here is the documentation for the method:
Title : seq_inds
Purpose : Get a list of residue positions (indices) for all
identical
: or conserved residues in the query or sbjct sequence.
Example : @s_ind = $hsp->seq_inds('query', 'identical');
: @h_ind = $hsp->seq_inds('hit', 'conserved');
: @h_ind = $hsp->seq_inds('hit', 'conserved', 1);
Returns : List of integers
: May include ranges if collapse is true.
Argument : seq_type = 'query' or 'hit' or 'sbjct' (default = query)
('sbjct' is synonymous with 'hit')
class = 'identical' or 'conserved' or 'nomatch' or
'gap'
(default = identical)
(can be shortened to 'id' or 'cons')
collapse = boolean, if true, consecutive positions are
merged
using a range notation, e.g., "1 2 3 4 5 7 9
10 11"
collapses to "1-5 7 9-11". This is useful for
consolidating long lists. Default = no
collapse.
-jason
On Jan 23, 2009, at 8:05 AM, Wen-Zhi WANG wrote:
> Dear Jason,
>
> I'm a new guy of bioperl. These days I try to output the unmatched
> bases (DNA vs. DNA) report with special format, which like
> A73G T195C A234G A263G C249- -309C. ([ATCGN-]\d+[ATCGRYN-])
> The first letter indicates nt base of subject, following integer
> is the unmatch base index accoring subject, the last letter is the
> nt base of query sequence. "-" stands for gap (-309C is an ins
> according subject, C249- is a del on the other hand).
> Bio::Search::Hit::HitI::seq_inds() method seems the right tool of
> this mission. However, it only gives the nomatch location(s). Is
> there some method could return sbjct ind base/aa, query ind base/aa
> and the nomatch location according either sbjct or query?
>
> Thank you very much!
> Happy Chinese New Year!
>
> my perl script is:
> ====================
> #!/usr/bin/perl
> use Bio::SearchIO;
>
> my $file = './test.fasta';
> my $in = new Bio::SearchIO(-format => 'fasta', -file => $file);
> my $r = $in->next_result;
> my $h = $r->next_hit;
> my @inds = ();
> while( my $hsp = $h->next_hsp ) {
> push @inds, $hsp->seq_inds('hit' => 'nomatch', 1);
> }
> print ">", $r->query_name, "\t", $r->query_description, "\n";
> print "@inds\n";
>
> exit(0);
> __END__
>
> The Fasta output report:
> ==================
> # fasta35 DQ272107.fas AC_000021.fas
> FASTA searches a protein or DNA sequence data bank
> version 35.04 Aug. 28, 2008
> Please cite:
> W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
> Query: DQ272107.fas
> 1>>>gi|78775891|gb|DQ272107.1| Homo sapiens isolate QH9505
> mitochondrion, compl - 16570 nt
> Library: AC_000021.fas 16569 residues in 1 sequences
> 16569 residues in 1 sequences
> Statistics: (shuffled [500]) MLE statistics: Lambda= 0.0840;
> K=5.185e-06
> Algorithm: FASTA (3.5 Sept 2006) [optimized]
> Parameters: +5/-4 matrix (5:-4) ktup: 6
> join: 95, opt: 80, open/ext: -12/-4, width: 16
> Scan time: 3.420
> The best scores are: opt bits
> E(1)
> gi|115315570|ref|AC_000021.2| Homo sapiens mit (16569) [f] 82516
> 10011.5 0
> gi|115315570|ref|AC_000021.2| Homo sapiens mit (16569) [r] 88
> 28.2 0.59
>>> gi|115315570|ref|AC_000021.2| Homo sapiens mitochondri (16569 nt)
> initn: 68614 init1: 67103 opt: 82516 Z-score: 54000.5 bits:
> 10011.5 E(): 0
> banded Smith-Waterman score: 82516; 99.8% identity (99.8% similar)
> in 16571 nt overlap (1-16570:1-16569)
> 10 20 30 40 50 60
> gi|787 GATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTT
> 10 20 30 40 50 60
> 70 80 90 100 110 120
> gi|787 CGTCTGGGGGGTGTGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTC
> :::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGTCTGGGGGGTATGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTC
> 70 80 90 100 110 120
> 130 140 150 160 170 180
> gi|787 GCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT
> 130 140 150 160 170 180
> 190 200 210 220 230 240
> gi|787 ACAGGCGAACATACCTACTAAAGTGTGTTAATTAATTAATGCTTGTAGGACATAATAATA
> :::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACAGGCGAACATACTTACTAAAGTGTGTTAATTAATTAATGCTTGTAGGACATAATAATA
> 190 200 210 220 230 240
> 250 260 270 280 290 300
> gi|787 ACAATTGAATGTCTGCACAGCCGCTTTCCACACAGACATCATAACAAAAAATTTCCACCA
> :::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
> gi|115 ACAATTGAATGTCTGCACAGCCACTTTCCACACAGACATCATAACAAAAAATTTCCACCA
> 250 260 270 280 290 300
> 310 320 330 340 350 360
> gi|787 AACCCCCCCCTCCCCCCGCTTCTGGCCACAGCACTTAAACACATCTCTGCCAAACCCCAA
> ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AACCCCCCC--TCCCCCGCTTCTGGCCACAGCACTTAAACACATCTCTGCCAAACCCCAA
> 310 320 330 340 350
> 370 380 390 400 410 420
> gi|787 AAACAAAGAACCCTAACACCAGCCTAACCAGATTTCAAATTTTATCTTTTGGCGGTATGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAACAAAGAACCCTAACACCAGCCTAACCAGATTTCAAATTTTATCTTTTGGCGGTATGC
> 360 370 380 390 400 410
> 430 440 450 460 470 480
> gi|787 ACTTTTAACAGTCACCCCCCAACTAACACATTATTTTCCCCTCCCACTCCCATACTACTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACTTTTAACAGTCACCCCCCAACTAACACATTATTTTCCCCTCCCACTCCCATACTACTA
> 420 430 440 450 460 470
> 490 500 510 520 530 540
> gi|787 ATCTCATCAACACAACCCCCGCCCATCCTACCCAGCACACACACACCGCTGCTAACCCCA
> :::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATCTCATCAATACAACCCCCGCCCATCCTACCCAGCACACACACACCGCTGCTAACCCCA
> 480 490 500 510 520 530
> 550 560 570 580 590 600
> gi|787 TACCCCGAACCAACCAAACCCCAAAGACACCCCCCACAGTTTATGTAGCTTACCTCCTCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACCCCGAACCAACCAAACCCCAAAGACACCCCCCACAGTTTATGTAGCTTACCTCCTCA
> 540 550 560 570 580 590
> 610 620 630 640 650 660
> gi|787 AAGCAATACACTGAAAATGTTTAGACGGGCTCACATCACCCCATAAACAAATAGGTTTGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAGCAATACACTGAAAATGTTTAGACGGGCTCACATCACCCCATAAACAAATAGGTTTGG
> 600 610 620 630 640 650
> 670 680 690 700 710 720
> gi|787 TCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGA
> 660 670 680 690 700 710
> 730 740 750 760 770 780
> gi|787 GTTCACCCTCTAAATCACCACGATCAAAAGGGACAAGCATCAAGCACGCAGCAATGCAGC
> ::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
> gi|115 GTTCACCCTCTAAATCACCACGATCAAAAGGAACAAGCATCAAGCACGCAGCAATGCAGC
> 720 730 740 750 760 770
> 790 800 810 820 830 840
> gi|787 TCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAACAGCAGTGATTAACCTTTAGCAAT
> 780 790 800 810 820 830
> 850 860 870 880 890 900
> gi|787 AAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACC
> 840 850 860 870 880 890
> 910 920 930 940 950 960
> gi|787 GCGGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCGGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCC
> 900 910 920 930 940 950
> 970 980 990 1000 1010 1020
> gi|787 CCTCCCCAATAAAGCTAAAACTCACCTGAGTTGTAAAAAACTCCAGTTGACACAAAATAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTCCCCAATAAAGCTAAAACTCACCTGAGTTGTAAAAAACTCCAGTTGACACAAAATAG
> 960 970 980 990 1000 1010
> 1030 1040 1050 1060 1070 1080
> gi|787 ACTACGAAAGTGGCTTTAACATATCTGAACACACAATAGCTAAGACCCAAACTGGGATTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACTACGAAAGTGGCTTTAACATATCTGAACACACAATAGCTAAGACCCAAACTGGGATTA
> 1020 1030 1040 1050 1060 1070
> 1090 1100 1110 1120 1130 1140
> gi|787 GATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAG
> 1080 1090 1100 1110 1120 1130
> 1150 1160 1170 1180 1190 1200
> gi|787 AACACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATCCCTCTAGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AACACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATCCCTCTAGA
> 1140 1150 1160 1170 1180 1190
> 1210 1220 1230 1240 1250 1260
> gi|787 GGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATA
> 1200 1210 1220 1230 1240 1250
> 1270 1280 1290 1300 1310 1320
> gi|787 TACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAGCGCAAGTACCCACGTAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAGCGCAAGTACCCACGTAA
> 1260 1270 1280 1290 1300 1310
> 1330 1340 1350 1360 1370 1380
> gi|787 AGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTCTACCCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTCTACCCC
> 1320 1330 1340 1350 1360 1370
> 1390 1400 1410 1420 1430 1440
> gi|787 AGAAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTG
> :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGAAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTA
> 1380 1390 1400 1410 1420 1430
> 1450 1460 1470 1480 1490 1500
> gi|787 AGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCC
> 1440 1450 1460 1470 1480 1490
> 1510 1520 1530 1540 1550 1560
> gi|787 TCAAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCAAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACAA
> 1500 1510 1520 1530 1540 1550
> 1570 1580 1590 1600 1610 1620
> gi|787 GTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGACGAACCAGAGTGTAGCTTAACA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGACGAACCAGAGTGTAGCTTAACA
> 1560 1570 1580 1590 1600 1610
> 1630 1640 1650 1660 1670 1680
> gi|787 CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCTGAGCTAAACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCTGAGCTAAACC
> 1620 1630 1640 1650 1660 1670
> 1690 1700 1710 1720 1730 1740
> gi|787 TAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAAT
> 1680 1690 1700 1710 1720 1730
> 1750 1760 1770 1780 1790 1800
> gi|787 AAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGA
> 1740 1750 1760 1770 1780 1790
> 1810 1820 1830 1840 1850 1860
> gi|787 TGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATG
> 1800 1810 1820 1830 1840 1850
> 1870 1880 1890 1900 1910 1920
> gi|787 AATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAG
> 1860 1870 1880 1890 1900 1910
> 1930 1940 1950 1960 1970 1980
> gi|787 CTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTA
> 1920 1930 1940 1950 1960 1970
> 1990 2000 2010 2020 2030 2040
> gi|787 TAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTT
> 1980 1990 2000 2010 2020 2030
> 2050 2060 2070 2080 2090 2100
> gi|787 AGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAG
> 2040 2050 2060 2070 2080 2090
> 2110 2120 2130 2140 2150 2160
> gi|787 TCCAAAGAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCCAAAGAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATT
> 2100 2110 2120 2130 2140 2150
> 2170 2180 2190 2200 2210 2220
> gi|787 TAACACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAACACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACACC
> 2160 2170 2180 2190 2200 2210
> 2230 2240 2250 2260 2270 2280
> gi|787 CACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTGGACCAATCTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTGGACCAATCTA
> 2220 2230 2240 2250 2260 2270
> 2290 2300 2310 2320 2330 2340
> gi|787 TCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAA
> 2280 2290 2300 2310 2320 2330
> 2350 2360 2370 2380 2390 2400
> gi|787 GCCTGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCCAATATCTACAATCAACCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCCTGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCCAATATCTACAATCAACCA
> 2340 2350 2360 2370 2380 2390
> 2410 2420 2430 2440 2450 2460
> gi|787 ACAAGTCATTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTTAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACAAGTCATTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTTAA
> 2400 2410 2420 2430 2440 2450
> 2470 2480 2490 2500 2510 2520
> gi|787 AAAAAGTAAAAGGAACTCGGCAAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAAAAGTAAAAGGAACTCGGCAAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTA
> 2460 2470 2480 2490 2500 2510
> 2530 2540 2550 2560 2570 2580
> gi|787 GCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACC
> 2520 2530 2540 2550 2560 2570
> 2590 2600 2610 2620 2630 2640
> gi|787 CTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAAATAGGGACCTGTATGAATGGCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAAATAGGGACCTGTATGAATGGCT
> 2580 2590 2600 2610 2620 2630
> 2650 2660 2670 2680 2690 2700
> gi|787 CCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGG
> 2640 2650 2660 2670 2680 2690
> 2710 2720 2730 2740 2750 2760
> gi|787 CGGGCATGACACAGCAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGCAAACAG
> ::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGGGCATAACACAGCAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGCAAACAG
> 2700 2710 2720 2730 2740 2750
> 2770 2780 2790 2800 2810 2820
> gi|787 TACCTAACAAACCCACAGGTCCTAAACTACCAAACCTGCATTAAAAATTTCGGTTGGGGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACCTAACAAACCCACAGGTCCTAAACTACCAAACCTGCATTAAAAATTTCGGTTGGGGC
> 2760 2770 2780 2790 2800 2810
> 2830 2840 2850 2860 2870 2880
> gi|787 GACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCACCAGTCAAAGCG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCACCAGTCAAAGCG
> 2820 2830 2840 2850 2860 2870
> 2890 2900 2910 2920 2930 2940
> gi|787 AACTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACCCTAGGGATAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AACTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACCCTAGGGATAA
> 2880 2890 2900 2910 2920 2930
> 2950 2960 2970 2980 2990 3000
> gi|787 CAGCGCAATCCTATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAGCGCAATCCTATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGAT
> 2940 2950 2960 2970 2980 2990
> 3010 3020 3030 3040 3050 3060
> gi|787 CAGGACATCCCAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCT
> ::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCT
> 3000 3010 3020 3030 3040 3050
> 3070 3080 3090 3100 3110
> gi|787 ACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTAC-TTCAAATTCCT
> :::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
> gi|115 ACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTACNTTCAAATTCCT
> 3060 3070 3080 3090 3100 3110
> 3120 3130 3140 3150 3160 3170
> gi|787 CCCTGTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCTGTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAAT
> 3120 3130 3140 3150 3160 3170
> 3180 3190 3200 3210 3220 3230
> gi|787 GATATCATCTCAACTTAGTATTATACCCACACCCACCCAAGAACAGGGTTTGTTAAGATG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GATATCATCTCAACTTAGTATTATACCCACACCCACCCAAGAACAGGGTTTGTTAAGATG
> 3180 3190 3200 3210 3220 3230
> 3240 3250 3260 3270 3280 3290
> gi|787 GCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACAGTCAGAGGTTCAATTCCTCTTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACAGTCAGAGGTTCAATTCCTCTTC
> 3240 3250 3260 3270 3280 3290
> 3300 3310 3320 3330 3340 3350
> gi|787 TTAACAACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTAACAACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGG
> 3300 3310 3320 3330 3340 3350
> 3360 3370 3380 3390 3400 3410
> gi|787 CATTCCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTACGCAAAGGCCCCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CATTCCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTACGCAAAGGCCCCA
> 3360 3370 3380 3390 3400 3410
> 3420 3430 3440 3450 3460 3470
> gi|787 ACGTTGTAGGCCCCTACGGGCTACTACAACCCTTCGCTGACGCCATAAAACTCTTCACCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACGTTGTAGGCCCCTACGGGCTACTACAACCCTTCGCTGACGCCATAAAACTCTTCACCA
> 3420 3430 3440 3450 3460 3470
> 3480 3490 3500 3510 3520 3530
> gi|787 AAGAGCCCCTAAAACCCGCCACATCTACCATCACCCTCTACATCACCGCCCCGACCTTAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAGAGCCCCTAAAACCCGCCACATCTACCATCACCCTCTACATCACCGCCCCGACCTTAG
> 3480 3490 3500 3510 3520 3530
> 3540 3550 3560 3570 3580 3590
> gi|787 CTCTCACCATCGCTCTTCTACTATGAACCCCCCTCCCCATACCCAACCCCCTGGTCAACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTCTCACCATCGCTCTTCTACTATGAACCCCCCTCCCCATACCCAACCCCCTGGTCAACC
> 3540 3550 3560 3570 3580 3590
> 3600 3610 3620 3630 3640 3650
> gi|787 TCAACCTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCTCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCAACCTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCTCT
> 3600 3610 3620 3630 3640 3650
> 3660 3670 3680 3690 3700 3710
> gi|787 GATCAGGGTGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GATCAGGGTGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCC
> 3660 3670 3680 3690 3700 3710
> 3720 3730 3740 3750 3760 3770
> gi|787 AAACAATCTCATATGAAGTCACCCTAGCCATCATTCTACTATCAACATTACTAATAAGTG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAACAATCTCATATGAAGTCACCCTAGCCATCATTCTACTATCAACATTACTAATAAGTG
> 3720 3730 3740 3750 3760 3770
> 3780 3790 3800 3810 3820 3830
> gi|787 GCTCCTTTAACCTCTCCACCCTTATCACAACACAAGAACACCTCTGATTACTCCTGCCAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCTCCTTTAACCTCTCCACCCTTATCACAACACAAGAACACCTCTGATTACTCCTGCCAT
> 3780 3790 3800 3810 3820 3830
> 3840 3850 3860 3870 3880 3890
> gi|787 CATGACCCTTGGCCATAATATGATTTATCTCCACACTAGCAGAGACCAACCGAACCCCCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CATGACCCTTGGCCATAATATGATTTATCTCCACACTAGCAGAGACCAACCGAACCCCCT
> 3840 3850 3860 3870 3880 3890
> 3900 3910 3920 3930 3940 3950
> gi|787 TCGACCTTGCCGAAGGGGAGTCCGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCGACCTTGCCGAAGGGGAGTCCGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAG
> 3900 3910 3920 3930 3940 3950
> 3960 3970 3980 3990 4000 4010
> gi|787 GCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATTATAATAAACACCCTCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATTATAATAAACACCCTCA
> 3960 3970 3980 3990 4000 4010
> 4020 4030 4040 4050 4060 4070
> gi|787 CCACTACAATCTTCCTAGGAACAACATATGACGCACTCTCCCCTGAACTCTACACAACAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCACTACAATCTTCCTAGGAACAACATATGACGCACTCTCCCCTGAACTCTACACAACAT
> 4020 4030 4040 4050 4060 4070
> 4080 4090 4100 4110 4120 4130
> gi|787 ATTTTGTCACCAAGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATTTTGTCACCAAGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACC
> 4080 4090 4100 4110 4120 4130
> 4140 4150 4160 4170 4180 4190
> gi|787 CCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCC
> 4140 4150 4160 4170 4180 4190
> 4200 4210 4220 4230 4240 4250
> gi|787 TAGCATTACTTATATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAGCATTACTTATATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAA
> 4200 4210 4220 4230 4240 4250
> 4260 4270 4280 4290 4300 4310
> gi|787 CCTAAGAAATATGTCTGATAAAAGAGTTACTTTGATAGAGTAAATAATAGGAGCTTAAAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTAAGAAATATGTCTGATAAAAGAGTTACTTTGATAGAGTAAATAATAGGAGCTTAAAC
> 4260 4270 4280 4290 4300 4310
> 4320 4330 4340 4350 4360 4370
> gi|787 CCCCTTATTTCTAGGACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCCTTATTTCTAGGACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTG
> 4320 4330 4340 4350 4360 4370
> 4380 4390 4400 4410 4420 4430
> gi|787 CCACCTATCACACCCCATCCTAAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCACCTATCACACCCCATCCTAAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCC
> 4380 4390 4400 4410 4420 4430
> 4440 4450 4460 4470 4480 4490
> gi|787 CGAAAATGTTGGTTATACCCTTCCCGTACTAATTAATCCCCTGGCCCAACCCGTCATCTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGAAAATGTTGGTTATACCCTTCCCGTACTAATTAATCCCCTGGCCCAACCCGTCATCTA
> 4440 4450 4460 4470 4480 4490
> 4500 4510 4520 4530 4540 4550
> gi|787 CTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGCTCGCACTGATTTTTTACCTG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGCTCGCACTGATTTTTTACCTG
> 4500 4510 4520 4530 4540 4550
> 4560 4570 4580 4590 4600 4610
> gi|787 AGTAGGCCTAGAAATAAACATGCTAGCTTTTATTCCAGTTCTAACCAAAAAAATAAACCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGTAGGCCTAGAAATAAACATGCTAGCTTTTATTCCAGTTCTAACCAAAAAAATAAACCC
> 4560 4570 4580 4590 4600 4610
> 4620 4630 4640 4650 4660 4670
> gi|787 TCGTTCCACAGAAGCTGCCATCAAGTATTTCCTCACGCAAGCAACCGCATCCATAATCCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCGTTCCACAGAAGCTGCCATCAAGTATTTCCTCACGCAAGCAACCGCATCCATAATCCT
> 4620 4630 4640 4650 4660 4670
> 4680 4690 4700 4710 4720 4730
> gi|787 TCTAATAGCTATCCTCTTCAACAATATACTCTCCGGACAATGAACCATAACCAATACTAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCTAATAGCTATCCTCTTCAACAATATACTCTCCGGACAATGAACCATAACCAATACTAC
> 4680 4690 4700 4710 4720 4730
> 4740 4750 4760 4770 4780 4790
> gi|787 CAATCAATACTCATCATTAATAATCATAATGGCTATAGCAATAAAACTAGGAATAGCCCC
> :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
> gi|115 CAATCAATACTCATCATTAATAATCATAATAGCTATAGCAATAAAACTAGGAATAGCCCC
> 4740 4750 4760 4770 4780 4790
> 4800 4810 4820 4830 4840 4850
> gi|787 CTTTCACTTCTGAGTCCCAGAGGTTACCCAAGGCACCCCTCTGACATCCGGCCTGCTTCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTTTCACTTCTGAGTCCCAGAGGTTACCCAAGGCACCCCTCTGACATCCGGCCTGCTTCT
> 4800 4810 4820 4830 4840 4850
> 4860 4870 4880 4890 4900 4910
> gi|787 TCTCACATGACAAAAACTAGCCCCTATCTCAATCATATACCAAATCTCTCCCTCACTAAA
> :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
> gi|115 TCTCACATGACAAAAACTAGCCCCCATCTCAATCATATACCAAATCTCTCCCTCACTAAA
> 4860 4870 4880 4890 4900 4910
> 4920 4930 4940 4950 4960 4970
> gi|787 CGTAAGCCTTCTCCTCACTCTCTCAATCTTATCCATCATAGCAGGCAGTTGAGGTGGATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGTAAGCCTTCTCCTCACTCTCTCAATCTTATCCATCATAGCAGGCAGTTGAGGTGGATT
> 4920 4930 4940 4950 4960 4970
> 4980 4990 5000 5010 5020 5030
> gi|787 AAACCAAACCCAGCTACGCAAAATCTTAGCATACTCCTCAATTACCCACATAGGATGAAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAACCAAACCCAGCTACGCAAAATCTTAGCATACTCCTCAATTACCCACATAGGATGAAT
> 4980 4990 5000 5010 5020 5030
> 5040 5050 5060 5070 5080 5090
> gi|787 AATAGCAGTTCTACCGTACAACCCTAACATAACCATTCTTAATTTAACTATTTATATTAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATAGCAGTTCTACCGTACAACCCTAACATAACCATTCTTAATTTAACTATTTATATTAT
> 5040 5050 5060 5070 5080 5090
> 5100 5110 5120 5130 5140 5150
> gi|787 CCTAACTACTACCGCATTCCTACTACTCAACTTAAACTCCAGCACCACGACCCTACTACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTAACTACTACCGCATTCCTACTACTCAACTTAAACTCCAGCACCACGACCCTACTACT
> 5100 5110 5120 5130 5140 5150
> 5160 5170 5180 5190 5200 5210
> gi|787 ATCTCGCACCTGAAACAAGATAACATGACTAACACCCTTAATTCCATCCACCCTCCTCTC
> ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
> gi|115 ATCTCGCACCTGAAACAAGCTAACATGACTAACACCCTTAATTCCATCCACCCTCCTCTC
> 5160 5170 5180 5190 5200 5210
> 5220 5230 5240 5250 5260 5270
> gi|787 CCTAGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCGAAGAATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTAGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCGAAGAATT
> 5220 5230 5240 5250 5260 5270
> 5280 5290 5300 5310 5320 5330
> gi|787 CACAAAAAACAATAGCCTCATCATCCCCACCATCATAGCCACCATCACCCTCCTTAACCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CACAAAAAACAATAGCCTCATCATCCCCACCATCATAGCCACCATCACCCTCCTTAACCT
> 5280 5290 5300 5310 5320 5330
> 5340 5350 5360 5370 5380 5390
> gi|787 CTACTTCTACCTACGCCTAATCTACTCCACCTCAATCACACTACTCCCCATATCTAACAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTACTTCTACCTACGCCTAATCTACTCCACCTCAATCACACTACTCCCCATATCTAACAA
> 5340 5350 5360 5370 5380 5390
> 5400 5410 5420 5430 5440 5450
> gi|787 CGTAAAAATAAAATGACAGTTTGAACATACAAAACCCACCCCATTCCTCCCCACACTCAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGTAAAAATAAAATGACAGTTTGAACATACAAAACCCACCCCATTCCTCCCCACACTCAT
> 5400 5410 5420 5430 5440 5450
> 5460 5470 5480 5490 5500 5510
> gi|787 CGCCCTTACCACGCTACTCCTACCTATCTCCCCTTTTATACTAATAATCTTATAGAAATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGCCCTTACCACGCTACTCCTACCTATCTCCCCTTTTATACTAATAATCTTATAGAAATT
> 5460 5470 5480 5490 5500 5510
> 5520 5530 5540 5550 5560 5570
> gi|787 TAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAATACTTAATTTCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAATACTTAATTTCT
> 5520 5530 5540 5550 5560 5570
> 5580 5590 5600 5610 5620 5630
> gi|787 GTAACAGCTAAGGACTGCAAAACCCCACTCTGCATCAACTGAACGCAAATCAGCCACTTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTAACAGCTAAGGACTGCAAAACCCCACTCTGCATCAACTGAACGCAAATCAGCCACTTT
> 5580 5590 5600 5610 5620 5630
> 5640 5650 5660 5670 5680 5690
> gi|787 AATTAAGCTAAGCCCTTACTAGACCAATGGGACTTAAACCCACAAACACTTAGTTAACAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATTAAGCTAAGCCCTTACTAGACCAATGGGACTTAAACCCACAAACACTTAGTTAACAG
> 5640 5650 5660 5670 5680 5690
> 5700 5710 5720 5730 5740 5750
> gi|787 CTAAGCACCCTAATCAACTGGCTTCAATCTACTTCTCCCGCCGCCGGGAAAAAAGGCGGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTAAGCACCCTAATCAACTGGCTTCAATCTACTTCTCCCGCCGCCGGGAAAAAAGGCGGG
> 5700 5710 5720 5730 5740 5750
> 5760 5770 5780 5790 5800 5810
> gi|787 AGAAGCCCCGGCAGGTTTGAAGCTGCTTCTTCGAATTTGCAATTCAATATGAAAATCACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGAAGCCCCGGCAGGTTTGAAGCTGCTTCTTCGAATTTGCAATTCAATATGAAAATCACC
> 5760 5770 5780 5790 5800 5810
> 5820 5830 5840 5850 5860 5870
> gi|787 TCGGAGCTGGTAAAAAGAGGCCTAACCCCTGTCTTTAGATTTACAGTCCAATGCTTCACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCGGAGCTGGTAAAAAGAGGCCTAACCCCTGTCTTTAGATTTACAGTCCAATGCTTCACT
> 5820 5830 5840 5850 5860 5870
> 5880 5890 5900 5910 5920 5930
> gi|787 CAGCCATTTTACCTCACCCCCACTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAGCCATTTTACCTCACCCCCACTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCA
> 5880 5890 5900 5910 5920 5930
> 5940 5950 5960 5970 5980 5990
> gi|787 CAAAGACATTGGAACACTATACCTATTATTCGGCGCATGAGCTGGAGTCCTAGGCACAGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAAAGACATTGGAACACTATACCTATTATTCGGCGCATGAGCTGGAGTCCTAGGCACAGC
> 5940 5950 5960 5970 5980 5990
> 6000 6010 6020 6030 6040 6050
> gi|787 TCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAGCCTTCTAGGTAACGACCA
> ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
> gi|115 TCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCA
> 6000 6010 6020 6030 6040 6050
> 6060 6070 6080 6090 6100 6110
> gi|787 CATCTACAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAATACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CATCTACAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAATACC
> 6060 6070 6080 6090 6100 6110
> 6120 6130 6140 6150 6160 6170
> gi|787 CATCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCCCCGATAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CATCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCCCCGATAT
> 6120 6130 6140 6150 6160 6170
> 6180 6190 6200 6210 6220 6230
> gi|787 GGCGTTTCCCCGCATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTCTCCTACTCCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GGCGTTTCCCCGCATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTCTCCTACTCCT
> 6180 6190 6200 6210 6220 6230
> 6240 6250 6260 6270 6280 6290
> gi|787 GCTCGCATCTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCTCGCATCTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTT
> 6240 6250 6260 6270 6280 6290
> 6300 6310 6320 6330 6340 6350
> gi|787 AGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCT
> 6300 6310 6320 6330 6340 6350
> 6360 6370 6380 6390 6400 6410
> gi|787 AGCAGGTGTCTCCTCTATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGCAGGTGTCTCCTCTATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAA
> 6360 6370 6380 6390 6400 6410
> 6420 6430 6440 6450 6460 6470
> gi|787 ACCCCCTGCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACCCCCTGCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGC
> 6420 6430 6440 6450 6460 6470
> 6480 6490 6500 6510 6520 6530
> gi|787 AGTCCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGTCCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGA
> 6480 6490 6500 6510 6520 6530
> 6540 6550 6560 6570 6580 6590
> gi|787 CCGCAACCTCAACACCACCTTCTTCGACCCCGCCGGAGGAGGAGACCCCATTCTATACCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCGCAACCTCAACACCACCTTCTTCGACCCCGCCGGAGGAGGAGACCCCATTCTATACCA
> 6540 6550 6560 6570 6580 6590
> 6600 6610 6620 6630 6640 6650
> gi|787 ACACCTATTCTGATTTTTCGGTCACCCTGAAGTTTATATTCTTATCCTACCAGGCTTCGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACACCTATTCTGATTTTTCGGTCACCCTGAAGTTTATATTCTTATCCTACCAGGCTTCGG
> 6600 6610 6620 6630 6640 6650
> 6660 6670 6680 6690 6700 6710
> gi|787 AATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTTGGATACATAGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTTGGATACATAGG
> 6660 6670 6680 6690 6700 6710
> 6720 6730 6740 6750 6760 6770
> gi|787 TATGGTCTGAGCTATGATATCAATTGGCTTCCTAGGGTTTATCGTGTGAGCACACCATAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TATGGTCTGAGCTATGATATCAATTGGCTTCCTAGGGTTTATCGTGTGAGCACACCATAT
> 6720 6730 6740 6750 6760 6770
> 6780 6790 6800 6810 6820 6830
> gi|787 ATTTACAGTAGGAATAGACGTAGACACACGAGCATATTTCACCTCCGCTACCATAATCAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATTTACAGTAGGAATAGACGTAGACACACGAGCATATTTCACCTCCGCTACCATAATCAT
> 6780 6790 6800 6810 6820 6830
> 6840 6850 6860 6870 6880 6890
> gi|787 CGCTATCCCCACCGGCGTCAAAGTATTTAGCTGACTCGCCACACTCCACGGAAGCAATAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGCTATCCCCACCGGCGTCAAAGTATTTAGCTGACTCGCCACACTCCACGGAAGCAATAT
> 6840 6850 6860 6870 6880 6890
> 6900 6910 6920 6930 6940 6950
> gi|787 GAAATGATCTGCTGCAGTGCTCTGAGCCCTAGGATTCATCTTTCTTTTCACCGTAGGTGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAAATGATCTGCTGCAGTGCTCTGAGCCCTAGGATTCATCTTTCTTTTCACCGTAGGTGG
> 6900 6910 6920 6930 6940 6950
> 6960 6970 6980 6990 7000 7010
> gi|787 CCTGACTGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGTACTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTGACTGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGTACTA
> 6960 6970 6980 6990 7000 7010
> 7020 7030 7040 7050 7060 7070
> gi|787 CGTTGTAGCTCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGG
> ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGTTGTAGCCCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGG
> 7020 7030 7040 7050 7060 7070
> 7080 7090 7100 7110 7120 7130
> gi|787 CTTCATTCACTGATTTCCCCTATTCTCAGGCTACACCCTAGACCAAACCTACGCCAAAAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTTCATTCACTGATTTCCCCTATTCTCAGGCTACACCCTAGACCAAACCTACGCCAAAAT
> 7080 7090 7100 7110 7120 7130
> 7140 7150 7160 7170 7180 7190
> gi|787 CCATTTCACTATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTCGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCATTTCACTATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTCGG
> 7140 7150 7160 7170 7180 7190
> 7200 7210 7220 7230 7240 7250
> gi|787 CCTATCCGGAATGCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAACAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTATCCGGAATGCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAACAT
> 7200 7210 7220 7230 7240 7250
> 7260 7270 7280 7290 7300 7310
> gi|787 CCTATCATCTGTAGGCTCATTCATTTCTCTAACAGCAGTAATATTAATAATTTTCATGAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTATCATCTGTAGGCTCATTCATTTCTCTAACAGCAGTAATATTAATAATTTTCATGAT
> 7260 7270 7280 7290 7300 7310
> 7320 7330 7340 7350 7360 7370
> gi|787 TTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACCCTCCATAAACCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACCCTCCATAAACCT
> 7320 7330 7340 7350 7360 7370
> 7380 7390 7400 7410 7420 7430
> gi|787 GGAGTGACTATATGGATGCCCCCCACCCTACCACACATTCGAAGAACCCGTATACATAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GGAGTGACTATATGGATGCCCCCCACCCTACCACACATTCGAAGAACCCGTATACATAAA
> 7380 7390 7400 7410 7420 7430
> 7440 7450 7460 7470 7480 7490
> gi|787 ATCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAAGCTGGTTTCAAGCCAACCCCATGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAAGCTGGTTTCAAGCCAACCCCATGG
> 7440 7450 7460 7470 7480 7490
> 7500 7510 7520 7530 7540 7550
> gi|787 CCTCCATGACTTTTTCAAAAAGGTATTAGAAAAACCATTTCATAACTTTGTCAAAGTTAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTCCATGACTTTTTCAAAAAGGTATTAGAAAAACCATTTCATAACTTTGTCAAAGTTAA
> 7500 7510 7520 7530 7540 7550
> 7560 7570 7580 7590 7600 7610
> gi|787 ATTATAGGCTAAATCCTATATATCTTAATGGCACATGCAGCGCAAGTAGGTCTACAAGAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATTATAGGCTAAATCCTATATATCTTAATGGCACATGCAGCGCAAGTAGGTCTACAAGAC
> 7560 7570 7580 7590 7600 7610
> 7620 7630 7640 7650 7660 7670
> gi|787 GCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATT
> 7620 7630 7640 7650 7660 7670
> 7680 7690 7700 7710 7720 7730
> gi|787 TTCCTTATCTGCTTCCTAGTCCTGTATGCCCTTTTCCTAACACTCACAACAAAACTAACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTCCTTATCTGCTTCCTAGTCCTGTATGCCCTTTTCCTAACACTCACAACAAAACTAACT
> 7680 7690 7700 7710 7720 7730
> 7740 7750 7760 7770 7780 7790
> gi|787 AATACTAACATCTCAGACGCTCAGGAAATAGAAACCGTCTGAACTATCCTGCCCGCCATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATACTAACATCTCAGACGCTCAGGAAATAGAAACCGTCTGAACTATCCTGCCCGCCATC
> 7740 7750 7760 7770 7780 7790
> 7800 7810 7820 7830 7840 7850
> gi|787 ATCCTAGTCCTCATCGCCCTCCCATCCCTACGCATCCTTTACATAACAGACGAGGTCAAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATCCTAGTCCTCATCGCCCTCCCATCCCTACGCATCCTTTACATAACAGACGAGGTCAAC
> 7800 7810 7820 7830 7840 7850
> 7860 7870 7880 7890 7900 7910
> gi|787 GATCCCTCCCTTACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACGAGTACACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GATCCCTCCCTTACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACGAGTACACC
> 7860 7870 7880 7890 7900 7910
> 7920 7930 7940 7950 7960 7970
> gi|787 GACTACGGCGGACTAATCTTCAACTCCTACATACTTCCCCCATTATTCCTAGAACCAGGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GACTACGGCGGACTAATCTTCAACTCCTACATACTTCCCCCATTATTCCTAGAACCAGGC
> 7920 7930 7940 7950 7960 7970
> 7980 7990 8000 8010 8020 8030
> gi|787 GACCTGCGACTCCTTGACGTTGACAATCGAGTAGTACTCCCGATTGAAGCCCCCATTCGT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GACCTGCGACTCCTTGACGTTGACAATCGAGTAGTACTCCCGATTGAAGCCCCCATTCGT
> 7980 7990 8000 8010 8020 8030
> 8040 8050 8060 8070 8080 8090
> gi|787 ATAATAATTACATCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATAATAATTACATCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAA
> 8040 8050 8060 8070 8080 8090
> 8100 8110 8120 8130 8140 8150
> gi|787 ACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGGGTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGGGTA
> 8100 8110 8120 8130 8140 8150
> 8160 8170 8180 8190 8200 8210
> gi|787 TACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTA
> 8160 8170 8180 8190 8200 8210
> 8220 8230 8240 8250 8260 8270
> gi|787 GAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCACCCCCTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCACCCCCTC
> 8220 8230 8240 8250 8260 8270
> 8280 8290 8300 8310 8320 8330
> gi|787 TACCCCCTCTAGAGCCCACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACCCCCTCTAGAGCCCACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTA
> 8280 8290 8300 8310 8320 8330
> 8340 8350 8360 8370 8380 8390
> gi|787 AGAGAACCAACACCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATGGCCCACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGAGAACCAACACCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATGGCCCACC
> 8340 8350 8360 8370 8380 8390
> 8400 8410 8420 8430 8440 8450
> gi|787 ATAATTACCCCCATATTCCTTACACTATTCCTCATCACCCAACTAAAAATATTAAACACA
> ::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATAATTACCCCCATACTCCTTACACTATTCCTCATCACCCAACTAAAAATATTAAACACA
> 8400 8410 8420 8430 8440 8450
> 8460 8470 8480 8490 8500 8510
> gi|787 AACTACCACCTACCTCCCTCACCAAAGCCCATAAAAATAAAAAATTATAACAAACCCTGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AACTACCACCTACCTCCCTCACCAAAGCCCATAAAAATAAAAAATTATAACAAACCCTGA
> 8460 8470 8480 8490 8500 8510
> 8520 8530 8540 8550 8560 8570
> gi|787 GAACCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTAGGCCTAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAACCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTAGGCCTAC
> 8520 8530 8540 8550 8560 8570
> 8580 8590 8600 8610 8620 8630
> gi|787 CCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAATATCTCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAATATCTCA
> 8580 8590 8600 8610 8620 8630
> 8640 8650 8660 8670 8680 8690
> gi|787 TCAACAACCGACTAATCACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCAACAACCGACTAATCACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGA
> 8640 8650 8660 8670 8680 8690
> 8700 8710 8720 8730 8740 8750
> gi|787 TAGCCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTT
> :: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAACCATACACAACACTAAAGGACGAACCTGATCTCTTATACTAGTATCCTTAATCATTT
> 8700 8710 8720 8730 8740 8750
> 8760 8770 8780 8790 8800 8810
> gi|787 TTATTGCCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTATTGCCACAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAACCACCCAAC
> 8760 8770 8780 8790 8800 8810
> 8820 8830 8840 8850 8860 8870
> gi|787 TATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTC
> ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
> gi|115 TATCTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCACAGTGATTATAGGCTTTC
> 8820 8830 8840 8850 8860 8870
> 8880 8890 8900 8910 8920 8930
> gi|787 GCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCCTTA
> 8880 8890 8900 8910 8920 8930
> 8940 8950 8960 8970 8980 8990
> gi|787 TCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCG
> 8940 8950 8960 8970 8980 8990
> 9000 9010 9020 9030 9040 9050
> gi|787 TACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCA
> 9000 9010 9020 9030 9040 9050
> 9060 9070 9080 9090 9100 9110
> gi|787 CCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTC
> 9060 9070 9080 9090 9100 9110
> 9120 9130 9140 9150 9160 9170
> gi|787 TACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTCTAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTCTAG
> 9120 9130 9140 9150 9160 9170
> 9180 9190 9200 9210 9220 9230
> gi|787 TAAGCCTCTACCTGCACGACAACACATAATGACCCACCAATCACATGCCTATCATATAGT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TAAGCCTCTACCTGCACGACAACACATAATGACCCACCAATCACATGCCTATCATATAGT
> 9180 9190 9200 9210 9220 9230
> 9240 9250 9260 9270 9280 9290
> gi|787 AAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCGGCCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCGGCCT
> 9240 9250 9260 9270 9280 9290
> 9300 9310 9320 9330 9340 9350
> gi|787 AGCCATGTGATTTCACTTCCACTCCATAACGCTCCTCATACTAGGCCTACTAACCAACAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGCCATGTGATTTCACTTCCACTCCATAACGCTCCTCATACTAGGCCTACTAACCAACAC
> 9300 9310 9320 9330 9340 9350
> 9360 9370 9380 9390 9400 9410
> gi|787 ACTAACCATATACCAATGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGCCACCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACTAACCATATACCAATGATGGCGCGATGTAACACGAGAAAGCACATACCAAGGCCACCA
> 9360 9370 9380 9390 9400 9410
> 9420 9430 9440 9450 9460 9470
> gi|787 CACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTATTACCTCAGAAGT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTATTACCTCAGAAGT
> 9420 9430 9440 9450 9460 9470
> 9480 9490 9500 9510 9520 9530
> gi|787 TTTTTTCTTCGCAGGATTTTTCTGAGCCTTTTACCACTCCAGCCTAGCCCCTACCCCCCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTTTTTCTTCGCAGGATTTTTCTGAGCCTTTTACCACTCCAGCCTAGCCCCTACCCCCCA
> 9480 9490 9500 9510 9520 9530
> 9540 9550 9560 9570 9580 9590
> gi|787 ACTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCCTAGAAGTCCCACT
> : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCCTAGAAGTCCCACT
> 9540 9550 9560 9570 9580 9590
> 9600 9610 9620 9630 9640 9650
> gi|787 CCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCT
> 9600 9610 9620 9630 9640 9650
> 9660 9670 9680 9690 9700 9710
> gi|787 AATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCT
> 9660 9670 9680 9690 9700 9710
> 9720 9730 9740 9750 9760 9770
> gi|787 CTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGG
> 9720 9730 9740 9750 9760 9770
> 9780 9790 9800 9810 9820 9830
> gi|787 CATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGG
> 9780 9790 9800 9810 9820 9830
> 9840 9850 9860 9870 9880 9890
> gi|787 CTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACA
> 9840 9850 9860 9870 9880 9890
> 9900 9910 9920 9930 9940 9950
> gi|787 TCACTTTGGCTTCGAAGCCGCCGCCTGATACTGGCATTTTGTAGATGTGGTTTGACTATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCACTTTGGCTTCGAAGCCGCCGCCTGATACTGGCATTTTGTAGATGTGGTTTGACTATT
> 9900 9910 9920 9930 9940 9950
> 9960 9970 9980 9990 10000 10010
> gi|787 TCTGTATGTCTCCATCTATTGATGAGGGTCTTACTCTTTTAGTATAAATAGTACCGTTAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCTGTATGTCTCCATCTATTGATGAGGGTCTTACTCTTTTAGTATAAATAGTACCGTTAA
> 9960 9970 9980 9990 10000 10010
> 10020 10030 10040 10050 10060 10070
> gi|787 CTTCCAATTAACTAGTTTTGACAACATTCAAAAAAGAGTAATAAACTTCGCCTTAATTTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTTCCAATTAACTAGTTTTGACAACATTCAAAAAAGAGTAATAAACTTCGCCTTAATTTT
> 10020 10030 10040 10050 10060 10070
> 10080 10090 10100 10110 10120 10130
> gi|787 AATAATCAACACCCTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATAATCAACACCCTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACT
> 10080 10090 10100 10110 10120 10130
> 10140 10150 10160 10170 10180 10190
> gi|787 CAACGGCTACATAGAAAAATCCACCCCTTACGAGTGCGGCTTCGACCCTATATCCCCCGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAACGGCTACATAGAAAAATCCACCCCTTACGAGTGCGGCTTCGACCCTATATCCCCCGC
> 10140 10150 10160 10170 10180 10190
> 10200 10210 10220 10230 10240 10250
> gi|787 CCGCGTCCCTTTCTCCATAAAATTCTTCTTAGTAGCTATTACCTTCTTATTATTTGATCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCGCGTCCCTTTCTCCATAAAATTCTTCTTAGTAGCTATTACCTTCTTATTATTTGATCT
> 10200 10210 10220 10230 10240 10250
> 10260 10270 10280 10290 10300 10310
> gi|787 AGAAATTGCCCTCCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGAAATTGCCCTCCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAAT
> 10260 10270 10280 10290 10300 10310
> 10320 10330 10340 10350 10360 10370
> gi|787 AGTTATGTCATCCCTCTTATTAATCATCATCCTAGCCCTAAGTCTGGCCTATGAGTGACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGTTATGTCATCCCTCTTATTAATCATCATCCTAGCCCTAAGTCTGGCCTATGAGTGACT
> 10320 10330 10340 10350 10360 10370
> 10380 10390 10400 10410 10420 10430
> gi|787 ACAAAAAGGATTAGACTGAGCTGAATTGGTATATAGTTTAAACAAAACGAATGATTTCGA
> ::::::::::::::::::: : ::::::::::::::::::::::::::::::::::::::
> gi|115 ACAAAAAGGATTAGACTGAACCGAATTGGTATATAGTTTAAACAAAACGAATGATTTCGA
> 10380 10390 10400 10410 10420 10430
> 10440 10450 10460 10470 10480 10490
> gi|787 CTCATTAAATTATGATAATCATATTTACCAAATGCCCCTCATTTACATAAATATTATACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTCATTAAATTATGATAATCATATTTACCAAATGCCCCTCATTTACATAAATATTATACT
> 10440 10450 10460 10470 10480 10490
> 10500 10510 10520 10530 10540 10550
> gi|787 AGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCTCATATCCTCCCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCTCATATCCTCCCT
> 10500 10510 10520 10530 10540 10550
> 10560 10570 10580 10590 10600 10610
> gi|787 ACTATGCCTAGAAGGAATAATACTATCGCTGTTCATTATAGCTACTCTCATAACCCTCAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACTATGCCTAGAAGGAATAATACTATCGCTGTTCATTATAGCTACTCTCATAACCCTCAA
> 10560 10570 10580 10590 10600 10610
> 10620 10630 10640 10650 10660 10670
> gi|787 CACCCACTCCCTCTTAGCCAATATTGTGCCTATTGCCATACTAGTCTTTGCCGCCTGCGA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CACCCACTCCCTCTTAGCCAATATTGTGCCTATTGCCATACTAGTCTTTGCCGCCTGCGA
> 10620 10630 10640 10650 10660 10670
> 10680 10690 10700 10710 10720 10730
> gi|787 AGCAGCGGTGGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGCAGCGGTGGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGT
> 10680 10690 10700 10710 10720 10730
> 10740 10750 10760 10770 10780 10790
> gi|787 ACATAACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTACTACCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACATAACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTACTACCA
> 10740 10750 10760 10770 10780 10790
> 10800 10810 10820 10830 10840 10850
> gi|787 CTGACATGACTTTCCAAAAAACACATAATTTGAATCAACACAACCACCCACAGCCTAATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTGACATGACTTTCCAAAAAACACATAATTTGAATCAACACAACCACCCACAGCCTAATT
> 10800 10810 10820 10830 10840 10850
> 10860 10870 10880 10890 10900 10910
> gi|787 ATTAGCATCATCCCCCTACTATTTTTTAACCAAATCAACAACAACCTATTTAGCTGTTCC
> :::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATTAGCATCATCCCTCTACTATTTTTTAACCAAATCAACAACAACCTATTTAGCTGTTCC
> 10860 10870 10880 10890 10900 10910
> 10920 10930 10940 10950 10960 10970
> gi|787 CCAACCTTTTCCTCCGACCCCCTAACAACCCCCCTCCTAATACTAACTACCTGACTCCTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCAACCTTTTCCTCCGACCCCCTAACAACCCCCCTCCTAATACTAACTACCTGACTCCTA
> 10920 10930 10940 10950 10960 10970
> 10980 10990 11000 11010 11020 11030
> gi|787 CCCCTCACAATCATGGCAAGCCAACGCCACTTATCCAGTGAACCACTATCACGAAAAAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCCTCACAATCATGGCAAGCCAACGCCACTTATCCAGTGAACCACTATCACGAAAAAAA
> 10980 10990 11000 11010 11020 11030
> 11040 11050 11060 11070 11080 11090
> gi|787 CTCTACCTCTCTATACTAATCTCCCTACAAATCTCCTTAATTATAACATTCACAGCCACA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTCTACCTCTCTATACTAATCTCCCTACAAATCTCCTTAATTATAACATTCACAGCCACA
> 11040 11050 11060 11070 11080 11090
> 11100 11110 11120 11130 11140 11150
> gi|787 GAACTAATCATATTTTATATCTTCTTCGAAACCACACTTATCCCCACCTTGGCTATCATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAACTAATCATATTTTATATCTTCTTCGAAACCACACTTATCCCCACCTTGGCTATCATC
> 11100 11110 11120 11130 11140 11150
> 11160 11170 11180 11190 11200 11210
> gi|787 ACCCGATGAGGCAACCAGCCAGAACGCCTGAACGCAGGCACATACTTCCTATTCTACACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACCCGATGAGGCAACCAGCCAGAACGCCTGAACGCAGGCACATACTTCCTATTCTACACC
> 11160 11170 11180 11190 11200 11210
> 11220 11230 11240 11250 11260 11270
> gi|787 CTAGTAGGCTCCCTTCCCCTACTCATCGCACTAATTTACACTCACAACACCCTAGGCTCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTAGTAGGCTCCCTTCCCCTACTCATCGCACTAATTTACACTCACAACACCCTAGGCTCA
> 11220 11230 11240 11250 11260 11270
> 11280 11290 11300 11310 11320 11330
> gi|787 CTAAACATTCTACTACTCACTCTCACTGCCCAAGAACTATCAAACTCCTGAGCCAACAAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTAAACATTCTACTACTCACTCTCACTGCCCAAGAACTATCAAACTCCTGAGCCAACAAC
> 11280 11290 11300 11310 11320 11330
> 11340 11350 11360 11370 11380 11390
> gi|787 TTAATATGACTAGCTTACACAATAGCTTTTATAGTAAAGATACCTCTTTACGGACTCCAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTAATATGACTAGCTTACACAATAGCTTTTATAGTAAAGATACCTCTTTACGGACTCCAC
> 11340 11350 11360 11370 11380 11390
> 11400 11410 11420 11430 11440 11450
> gi|787 TTATGACTCCCTAAAGCCCATGTCGAAGCCCCCATCGCTGGGTCAATAGTACTTGCCGCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTATGACTCCCTAAAGCCCATGTCGAAGCCCCCATCGCTGGGTCAATAGTACTTGCCGCA
> 11400 11410 11420 11430 11440 11450
> 11460 11470 11480 11490 11500 11510
> gi|787 GTACTCTTAAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACCCCCTG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTACTCTTAAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACCCCCTG
> 11460 11470 11480 11490 11500 11510
> 11520 11530 11540 11550 11560 11570
> gi|787 ACAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGAGGCATAATTATAACAAGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGAGGCATAATTATAACAAGC
> 11520 11530 11540 11550 11560 11570
> 11580 11590 11600 11610 11620 11630
> gi|787 TCCATCTGCCTACGACAAACAGACCTAAAATCGCTCATTGCATACTCTTCAATCAGCCAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCCATCTGCCTACGACAAACAGACCTAAAATCGCTCATTGCATACTCTTCAATCAGCCAC
> 11580 11590 11600 11610 11620 11630
> 11640 11650 11660 11670 11680 11690
> gi|787 ATAGCCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGCAGTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATAGCCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGCAGTC
> 11640 11650 11660 11670 11680 11690
> 11700 11710 11720 11730 11740 11750
> gi|787 ATTCTCATAATCGCCCACGGACTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAAC
> :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
> gi|115 ATTCTCATAATCGCCCACGGGCTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAAC
> 11700 11710 11720 11730 11740 11750
> 11760 11770 11780 11790 11800 11810
> gi|787 TACGAACGCACTCACAGTCGCATCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACGAACGCACTCACAGTCGCATCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCA
> 11760 11770 11780 11790 11800 11810
> 11820 11830 11840 11850 11860 11870
> gi|787 CTAATAGCTTTTTGATGACTTCTAGCAAGCCTCGCTAACCTCGCCTTACCCCCCACTATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTAATAGCTTTTTGATGACTTCTAGCAAGCCTCGCTAACCTCGCCTTACCCCCCACTATT
> 11820 11830 11840 11850 11860 11870
> 11880 11890 11900 11910 11920 11930
> gi|787 AACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCTGATCAAATATCACTCTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCTGATCAAATATCACTCTC
> 11880 11890 11900 11910 11920 11930
> 11940 11950 11960 11970 11980 11990
> gi|787 CTACTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTACTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACA
> 11940 11950 11960 11970 11980 11990
> 12000 12010 12020 12030 12040 12050
> gi|787 ACACAATGGGGCTCACTCACCCACCACATTAACAACATAAAACCCTCATTCACACGAGAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACACAATGGGGCTCACTCACCCACCACATTAACAACATAAAACCCTCATTCACACGAGAA
> 12000 12010 12020 12030 12040 12050
> 12060 12070 12080 12090 12100 12110
> gi|787 AACACCCTCATGTTCATACACCTATCCCCCATTATCCTCCTATCCCTCAACCCCGACATC
> ::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::
> gi|115 AACACCCTCATGTTCATACACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATC
> 12060 12070 12080 12090 12100 12110
> 12120 12130 12140 12150 12160 12170
> gi|787 ATTACCGGGTTTTCCTCTTGTAAATATAGTTTAACCAAAACATCAGATTGTGAATCTGAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATTACCGGGTTTTCCTCTTGTAAATATAGTTTAACCAAAACATCAGATTGTGAATCTGAC
> 12120 12130 12140 12150 12160 12170
> 12180 12190 12200 12210 12220 12230
> gi|787 AACAGAGGCTTACGACCCCTTATTTACCGAGAAAGCTCACAAGAACTGCTAACTCATGCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AACAGAGGCTTACGACCCCTTATTTACCGAGAAAGCTCACAAGAACTGCTAACTCATGCC
> 12180 12190 12200 12210 12220 12230
> 12240 12250 12260 12270 12280 12290
> gi|787 CCCATGTCTAACAACATGGCTTTCTCAACTTTTAAAGGATAACAGCTATCCATTGGTCTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCATGTCTAACAACATGGCTTTCTCAACTTTTAAAGGATAACAGCTATCCATTGGTCTT
> 12240 12250 12260 12270 12280 12290
> 12300 12310 12320 12330 12340 12350
> gi|787 AGGCCCCAAAAATTTTGGTGCAACTCCAAATAAAAGTAATAACCATGCACACTACTATAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGGCCCCAAAAATTTTGGTGCAACTCCAAATAAAAGTAATAACCATGCACACTACTATAA
> 12300 12310 12320 12330 12340 12350
> 12360 12370 12380 12390 12400 12410
> gi|787 CCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTACCACCCTCGTTAACCCTAACA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTACCACCCTCGTTAACCCTAACA
> 12360 12370 12380 12390 12400 12410
> 12420 12430 12440 12450 12460 12470
> gi|787 AAAAAAACTCATACCCCCATTATGTAAAATCCATTGTCGCATCCACCTTTATTATCAGTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAAAAAACTCATACCCCCATTATGTAAAATCCATTGTCGCATCCACCTTTATTATCAGTC
> 12420 12430 12440 12450 12460 12470
> 12480 12490 12500 12510 12520 12530
> gi|787 TCTTCCCCACAACAATATTCATGTGCCTAGACCAAGAAGTTATTATCTCGAACTGACACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCTTCCCCACAACAATATTCATGTGCCTAGACCAAGAAGTTATTATCTCGAACTGACACT
> 12480 12490 12500 12510 12520 12530
> 12540 12550 12560 12570 12580 12590
> gi|787 GAGCCACAACCCAAACAACCCAGCTCTCCCTAAGCTTCAAACTAGACTACTTCTCCATAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAGCCACAACCCAAACAACCCAGCTCTCCCTAAGCTTCAAACTAGACTACTTCTCCATAA
> 12540 12550 12560 12570 12580 12590
> 12600 12610 12620 12630 12640 12650
> gi|787 TATTCATCCCTGTAGCATTGTTCGTTACATGGTCCATCATAGAATTCTCACTGTGATATA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TATTCATCCCTGTAGCATTGTTCGTTACATGGTCCATCATAGAATTCTCACTGTGATATA
> 12600 12610 12620 12630 12640 12650
> 12660 12670 12680 12690 12700 12710
> gi|787 TAAACTCAGACCCAAACATTAATCAGTTCTTCAAATATCTACTCATTTTCCTAATTACCA
> :::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::
> gi|115 TAAACTCAGACCCAAACATTAATCAGTTCTTCAAATATCTACTCATCTTCCTAATTACCA
> 12660 12670 12680 12690 12700 12710
> 12720 12730 12740 12750 12760 12770
> gi|787 TACTAATCTTAGTTACCGCTAACAACCTATTCCAACTGTTCATCGGCTGAGAGGGCGTAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACTAATCTTAGTTACCGCTAACAACCTATTCCAACTGTTCATCGGCTGAGAGGGCGTAG
> 12720 12730 12740 12750 12760 12770
> 12780 12790 12800 12810 12820 12830
> gi|787 GAATTATATCCTTCTTGCTCATCAGTTGATGATACGCCCGAGCAGATGCCAACACAGCAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAATTATATCCTTCTTGCTCATCAGTTGATGATACGCCCGAGCAGATGCCAACACAGCAG
> 12780 12790 12800 12810 12820 12830
> 12840 12850 12860 12870 12880 12890
> gi|787 CCATTCAAGCAATCCTATACAACCGTATCGGCGATATCGGTTTCATCCTCGCCTTAGCAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCATTCAAGCAATCCTATACAACCGTATCGGCGATATCGGTTTCATCCTCGCCTTAGCAT
> 12840 12850 12860 12870 12880 12890
> 12900 12910 12920 12930 12940 12950
> gi|787 GATTTATCCTACACTCCAACTCATGAGACCCACAACAAATAGCCCTTCTAAACGCTAATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GATTTATCCTACACTCCAACTCATGAGACCCACAACAAATAGCCCTTCTAAACGCTAATC
> 12900 12910 12920 12930 12940 12950
> 12960 12970 12980 12990 13000 13010
> gi|787 CAAGCCTCACCCCACTACTAGGCCTCCTCCTAGCAGCAGCAGGCAAATCAGCCCAATTAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAAGCCTCACCCCACTACTAGGCCTCCTCCTAGCAGCAGCAGGCAAATCAGCCCAATTAG
> 12960 12970 12980 12990 13000 13010
> 13020 13030 13040 13050 13060 13070
> gi|787 GTCTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCCTACTCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTCTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCCTACTCC
> 13020 13030 13040 13050 13060 13070
> 13080 13090 13100 13110 13120 13130
> gi|787 ACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCATCCGCTTCCACCCCCTAGCAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCATCCGCTTCCACCCCCTAGCAG
> 13080 13090 13100 13110 13120 13130
> 13140 13150 13160 13170 13180 13190
> gi|787 AAAATAGCCCACTAATCCAAACTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AAAATAGCCCACTAATCCAAACTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCG
> 13140 13150 13160 13170 13180 13190
> 13200 13210 13220 13230 13240 13250
> gi|787 CAGCAGTCTGCGCCCTTACACAAAATGACATCAAAAAAATCGTAGCCTTCTCCACTTCAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAGCAGTCTGCGCCCTTACACAAAATGACATCAAAAAAATCGTAGCCTTCTCCACTTCAA
> 13200 13210 13220 13230 13240 13250
> 13260 13270 13280 13290 13300 13310
> gi|787 GTCAACTAGGACTCATAATAGTTACAATCGGCATCAACCAACCACACCTAGCATTCCTGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTCAACTAGGACTCATAATAGTTACAATCGGCATCAACCAACCACACCTAGCATTCCTGC
> 13260 13270 13280 13290 13300 13310
> 13320 13330 13340 13350 13360 13370
> gi|787 ACATCTGTACCCACGCCTTCTTCAAAGCCATACTATTTATGTGCTCCGGGTCCATCATCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACATCTGTACCCACGCCTTCTTCAAAGCCATACTATTTATGTGCTCCGGGTCCATCATCC
> 13320 13330 13340 13350 13360 13370
> 13380 13390 13400 13410 13420 13430
> gi|787 ACAACCTTAACAATGAACAAGATATTCGAAAAATAGGAGGACTACTCAAAACCATACCTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACAACCTTAACAATGAACAAGATATTCGAAAAATAGGAGGACTACTCAAAACCATACCTC
> 13380 13390 13400 13410 13420 13430
> 13440 13450 13460 13470 13480 13490
> gi|787 TCACTTCAACCTCCCTCACCATTGGCAGCCTAGCATTAGCAGGAATACCTTTCCTCACAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCACTTCAACCTCCCTCACCATTGGCAGCCTAGCATTAGCAGGAATACCTTTCCTCACAG
> 13440 13450 13460 13470 13480 13490
> 13500 13510 13520 13530 13540 13550
> gi|787 GTTTCTACTCCAAAGACCACATCATCGAAACCGCAAACATATCATACACAAACGCCTGAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTTTCTACTCCAAAGACCACATCATCGAAACCGCAAACATATCATACACAAACGCCTGAG
> 13500 13510 13520 13530 13540 13550
> 13560 13570 13580 13590 13600 13610
> gi|787 CCCTATCTATTACTCTCATCGCTACCTCCCTGACAAGCGCCTATAGCACTCGAATAATTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCTATCTATTACTCTCATCGCTACCTCCCTGACAAGCGCCTATAGCACTCGAATAATTC
> 13560 13570 13580 13590 13600 13610
> 13620 13630 13640 13650 13660 13670
> gi|787 TTCTCACCCTAACAGGTCAACCTCGCTTCCCCACCCTTACTAACATTAACGAAAATAACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTCTCACCCTAACAGGTCAACCTCGCTTCCCCACCCTTACTAACATTAACGAAAATAACC
> 13620 13630 13640 13650 13660 13670
> 13680 13690 13700 13710 13720 13730
> gi|787 CCACCCTACTAAACCCCATTAAACGCCTGGCAGCCGGAAGCCTATTCGCAGGATTTCTCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCACCCTACTAAACCCCATTAAACGCCTGGCAGCCGGAAGCCTATTCGCAGGATTTCTCA
> 13680 13690 13700 13710 13720 13730
> 13740 13750 13760 13770 13780 13790
> gi|787 TTACTAACAACATTTCCCCCGCATCCCCCTTCCAAACAACAATCCCCCTCTACCTAAAAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTACTAACAACATTTCCCCCGCATCCCCCTTCCAAACAACAATCCCCCTCTACCTAAAAC
> 13740 13750 13760 13770 13780 13790
> 13800 13810 13820 13830 13840 13850
> gi|787 TCACAGCCCTCGCTGTCACTTTCCTAGGACTTCTAACAGCCCTAGACCTCAACTACCTAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCACAGCCCTCGCTGTCACTTTCCTAGGACTTCTAACAGCCCTAGACCTCAACTACCTAA
> 13800 13810 13820 13830 13840 13850
> 13860 13870 13880 13890 13900 13910
> gi|787 CCAACAAACTTAAAATAAAATCCCCACTATGCACATTTTATTTCTCCAACATACTCGGAT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCAACAAACTTAAAATAAAATCCCCACTATGCACATTTTATTTCTCCAACATACTCGGAT
> 13860 13870 13880 13890 13900 13910
> 13920 13930 13940 13950 13960 13970
> gi|787 TCTACCCTAGCATCACACACCGCACAATCCCCTATCTAGGCCTTCTTACGAGCCAAAACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCTACCCTAGCATCACACACCGCACAATCCCCTATCTAGGCCTTCTTACGAGCCAAAACC
> 13920 13930 13940 13950 13960 13970
> 13980 13990 14000 14010 14020 14030
> gi|787 TGCCCCTACTCCTCCTAGACCTAACCTGACTAGAAAAGCTATTACCTAAAACAATTTCAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TGCCCCTACTCCTCCTAGACCTAACCTGACTAGAAAAGCTATTACCTAAAACAATTTCAC
> 13980 13990 14000 14010 14020 14030
> 14040 14050 14060 14070 14080 14090
> gi|787 AGCACCAAATCTCCACCTCCATCATCACCTCAACCCAAAAAGGCATAATTAAACTTTACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AGCACCAAATCTCCACCTCCATCATCACCTCAACCCAAAAAGGCATAATTAAACTTTACT
> 14040 14050 14060 14070 14080 14090
> 14100 14110 14120 14130 14140 14150
> gi|787 TCCTCTCTTTCTTCTTCCCACTCATCCTAACCCTACTCCTAATCACATAACCTATTCCCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCCTCTCTTTCTTCTTCCCACTCATCCTAACCCTACTCCTAATCACATAACCTATTCCCC
> 14100 14110 14120 14130 14140 14150
> 14160 14170 14180 14190 14200 14210
> gi|787 CGAGCAATCTCAATTACAATATATACACCAACAAACAATGTTCAACCAGTAACTACTACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CGAGCAATCTCAATTACAATATATACACCAACAAACAATGTTCAACCAGTAACTACTACT
> 14160 14170 14180 14190 14200 14210
> 14220 14230 14240 14250 14260 14270
> gi|787 AATCAACGCCCATAATCATACAAAGCCCCCGCACCAATAGGATCCTCCCGAATCAACCCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATCAACGCCCATAATCATACAAAGCCCCCGCACCAATAGGATCCTCCCGAATCAACCCT
> 14220 14230 14240 14250 14260 14270
> 14280 14290 14300 14310 14320 14330
> gi|787 GACCCCTCTCCTTCATAAATTATTCAGCTTCCTACACTATTAAAGTTTACCACAACCACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GACCCCTCTCCTTCATAAATTATTCAGCTTCCTACACTATTAAAGTTTACCACAACCACC
> 14280 14290 14300 14310 14320 14330
> 14340 14350 14360 14370 14380 14390
> gi|787 ACCCCATCATACTCTTTCACCCACAGCACCAATCCTACCTCCATCGCTAACCCCACTAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACCCCATCATACTCTTTCACCCACAGCACCAATCCTACCTCCATCGCTAACCCCACTAAA
> 14340 14350 14360 14370 14380 14390
> 14400 14410 14420 14430 14440 14450
> gi|787 ACACTCACCAAGACCTCAACCCCTGACCCCCATGCCTCAGGATACTCCTCAATAGCCATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACACTCACCAAGACCTCAACCCCTGACCCCCATGCCTCAGGATACTCCTCAATAGCCATC
> 14400 14410 14420 14430 14440 14450
> 14460 14470 14480 14490 14500 14510
> gi|787 GCTGTAGTATATCCAAAGACAACCATCATTCCCCCTAAATAAATTAAAAAAACTATTAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCTGTAGTATATCCAAAGACAACCATCATTCCCCCTAAATAAATTAAAAAAACTATTAAA
> 14460 14470 14480 14490 14500 14510
> 14520 14530 14540 14550 14560 14570
> gi|787 CCCATATAACCTCCCCCAAAATTCAGAATAATAACACACCCGACCACACCGCTAACAATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCATATAACCTCCCCCAAAATTCAGAATAATAACACACCCGACCACACCGCTAACAATC
> 14520 14530 14540 14550 14560 14570
> 14580 14590 14600 14610 14620 14630
> gi|787 AATACTAAACCCCCATAAATAGGAGAAGGCTTAGAAGAAAACCCCACAAACCCCATTACT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 AATACTAAACCCCCATAAATAGGAGAAGGCTTAGAAGAAAACCCCACAAACCCCATTACT
> 14580 14590 14600 14610 14620 14630
> 14640 14650 14660 14670 14680 14690
> gi|787 AAACCCACACTCAACAGAAACAAAGCATATATCATTATTCTCGCACGGACTACAACCACG
> ::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
> gi|115 AAACCCACACTCAACAGAAACAAAGCATACATCATTATTCTCGCACGGACTACAACCACG
> 14640 14650 14660 14670 14680 14690
> 14700 14710 14720 14730 14740 14750
> gi|787 ACCAATGATATGAAAAACCATCGTTGTATTTCAACTACAAGAACACCAATGACCCCAATA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACCAATGATATGAAAAACCATCGTTGTATTTCAACTACAAGAACACCAATGACCCCAATA
> 14700 14710 14720 14730 14740 14750
> 14760 14770 14780 14790 14800 14810
> gi|787 CGCAAAATTAACCCCCTAATAAAACTAATTAACCACTCATTCATCGACCTCCCCACCCCA
> ::::::: :::::::::::::::: :::::::::::::::::::::::::::::::::::
> gi|115 CGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCTCCCCACCCCA
> 14760 14770 14780 14790 14800 14810
> 14820 14830 14840 14850 14860 14870
> gi|787 TCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCCAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCCAA
> 14820 14830 14840 14850 14860 14870
> 14880 14890 14900 14910 14920 14930
> gi|787 ATCACCACAGGACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATCACCACAGGACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTCA
> 14880 14890 14900 14910 14920 14930
> 14940 14950 14960 14970 14980 14990
> gi|787 TCAATCGCCCACATCACTCGAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCAATCGCCCACATCACTCGAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCC
> 14940 14950 14960 14970 14980 14990
> 15000 15010 15020 15030 15040 15050
> gi|787 AATGGCGCCTCAATATTCTTTATCTGCCTCTTCCTACACATCGGACGAGGCCTATATTAC
> :::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
> gi|115 AATGGCGCCTCAATATTCTTTATCTGCCTCTTCCTACACATCGGGCGAGGCCTATATTAC
> 15000 15010 15020 15030 15040 15050
> 15060 15070 15080 15090 15100 15110
> gi|787 GGATCATTTCTCTACTCAGAAACCTGAAACATCGGCATTATCCTCCTGCTTGCAACTATA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GGATCATTTCTCTACTCAGAAACCTGAAACATCGGCATTATCCTCCTGCTTGCAACTATA
> 15060 15070 15080 15090 15100 15110
> 15120 15130 15140 15150 15160 15170
> gi|787 GCAACAGCCTTCATAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCAACAGCCTTCATAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACA
> 15120 15130 15140 15150 15160 15170
> 15180 15190 15200 15210 15220 15230
> gi|787 GTAATTACAAACTTACTATCCGCCATCCCATACATTGGGACAGACCTAGTTCAATGAATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GTAATTACAAACTTACTATCCGCCATCCCATACATTGGGACAGACCTAGTTCAATGAATC
> 15180 15190 15200 15210 15220 15230
> 15240 15250 15260 15270 15280 15290
> gi|787 TGAGGAGGCTACTCAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TGAGGAGGCTACTCAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATC
> 15240 15250 15260 15270 15280 15290
> 15300 15310 15320 15330 15340 15350
> gi|787 TTACCCTTCATTATTGCAGCCCTAGCAGCACTCCACCTCCTATTCTTGCACGAAACGGGA
> :: :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
> gi|115 TTGCCCTTCATTATTGCAGCCCTAGCAACACTCCACCTCCTATTCTTGCACGAAACGGGA
> 15300 15310 15320 15330 15340 15350
> 15360 15370 15380 15390 15400 15410
> gi|787 TCAAACAACCCCCTAGGAATCACCTCCCATTCCGATAAAATCACCTTCCACCCTTACTAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TCAAACAACCCCCTAGGAATCACCTCCCATTCCGATAAAATCACCTTCCACCCTTACTAC
> 15360 15370 15380 15390 15400 15410
> 15420 15430 15440 15450 15460 15470
> gi|787 ACAATCAAAGACGCCCTCGGCTTACTTCTCTTCCTTCTCTCCTTAATGACATTAACACTA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ACAATCAAAGACGCCCTCGGCTTACTTCTCTTCCTTCTCTCCTTAATGACATTAACACTA
> 15420 15430 15440 15450 15460 15470
> 15480 15490 15500 15510 15520 15530
> gi|787 TTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACC
> 15480 15490 15500 15510 15520 15530
> 15540 15550 15560 15570 15580 15590
> gi|787 CCTCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCGTC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCGTC
> 15540 15550 15560 15570 15580 15590
> 15600 15610 15620 15630 15640 15650
> gi|787 CCTAACAAACTAGGAGGCGTCCTTGCCCTATTACTATCCATCCTCATCCTAGCAATAATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTAACAAACTAGGAGGCGTCCTTGCCCTATTACTATCCATCCTCATCCTAGCAATAATC
> 15600 15610 15620 15630 15640 15650
> 15660 15670 15680 15690 15700 15710
> gi|787 CCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCACTT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCACTT
> 15660 15670 15680 15690 15700 15710
> 15720 15730 15740 15750 15760 15770
> gi|787 TATTGACTCCTAGCCGCAGACCTCCTCATTCTAACCTGAATCGGAGGACAACCAGTAAGC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TATTGACTCCTAGCCGCAGACCTCCTCATTCTAACCTGAATCGGAGGACAACCAGTAAGC
> 15720 15730 15740 15750 15760 15770
> 15780 15790 15800 15810 15820 15830
> gi|787 TACCCTTTTACCATCATTGGACAAGTAGCATCCGTACTATACTTCACAACAATCCTAATC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 TACCCTTTTACCATCATTGGACAAGTAGCATCCGTACTATACTTCACAACAATCCTAATC
> 15780 15790 15800 15810 15820 15830
> 15840 15850 15860 15870 15880 15890
> gi|787 CTAATACCAACTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTGTCCTTGTAGT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTAATACCAACTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTGTCCTTGTAGT
> 15840 15850 15860 15870 15880 15890
> 15900 15910 15920 15930 15940 15950
> gi|787 ATAAACTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACAAATCA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATAAACTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACAAATCA
> 15900 15910 15920 15930 15940 15950
> 15960 15970 15980 15990 16000 16010
> gi|787 GAGAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCTAAGATTCTAATTTAAACTATT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GAGAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCTAAGATTCTAATTTAAACTATT
> 15960 15970 15980 15990 16000 16010
> 16020 16030 16040 16050 16060 16070
> gi|787 CTCTGTTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTCTGTTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAGTATTGACTCACCCATCAA
> 16020 16030 16040 16050 16060 16070
> 16080 16090 16100 16110 16120 16130
> gi|787 CAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CAACCGCTATGTATTTCGTACATTACTGCCAGCCACCATGAATATTGTACGGTACCATAA
> 16080 16090 16100 16110 16120 16130
> 16140 16150 16160 16170 16180 16190
> gi|787 ATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCTCATGCT
> ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
> gi|115 ATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCT
> 16140 16150 16160 16170 16180 16190
> 16200 16210 16220 16230 16240 16250
> gi|787 TACAAGCAAGTACAGCAATCAACCTTCAACTATCACACATCAACTGCAACTCCAAAGCCA
> :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
> gi|115 TACAAGCAAGTACAGCAATCAACCCTCAACTATCACACATCAACTGCAACTCCAAAGCCA
> 16200 16210 16220 16230 16240 16250
> 16260 16270 16280 16290 16300 16310
> gi|787 CCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCCCTCACCCACTAGGATACCAACAAACCTACCCACCCTTAACAGTACATAGTACATAAA
> 16260 16270 16280 16290 16300 16310
> 16320 16330 16340 16350 16360 16370
> gi|787 GCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCCCATGGATGACCCC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 GCCATTTACCGTACATAGCACATTACAGTCAAATCCCTTCTCGTCCCCATGGATGACCCC
> 16320 16330 16340 16350 16360 16370
> 16380 16390 16400 16410 16420 16430
> gi|787 CCTCAGATAGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAGTG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CCTCAGATAGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAGTG
> 16380 16390 16400 16410 16420 16430
> 16440 16450 16460 16470 16480 16490
> gi|787 CTACTCTCCTCGCTCCGGGCCCATAACACTTGGGGGTAGCTAAAGTGAACTGTATCCGAC
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 CTACTCTCCTCGCTCCGGGCCCATAACACTTGGGGGTAGCTAAAGTGAACTGTATCCGAC
> 16440 16450 16460 16470 16480 16490
> 16500 16510 16520 16530 16540 16550
> gi|787 ATCTGGTTCCTACTTCAGGGTCATAAAGCCTAAATAGCCCACACGTTCCCCTTAAATAAG
> ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
> gi|115 ATCTGGTTCCTACTTCAGGGTCATAAAGCCTAAATAGCCCACACGTTCCCCTTAAATAAG
> 16500 16510 16520 16530 16540 16550
> 16560 16570
> gi|787 ACATCACGATG
> :::::::::::
> gi|115 ACATCACGATG
> 16560
>>> gi|115315570|ref|AC_000021.2| Homo sapiens mitochondri (16569 nt)
> rev-comp initn: 84 init1: 84 opt: 88 Z-score: 46.5 bits: 28.2
> E(): 0.59
> banded Smith-Waterman score: 88; 68.3% identity (68.3% similar) in
> 41 nt overlap (1373-1333:1331-1371)
> 1400 1390 1380 1370 1360 1350
> gi|78- CATAAGGGCTATCGTAGTTTTCTGGGGTAGAAAATGTAGCCCATTTCTTGCCACCTCATG
> :: :::::::::: :: :: :::
> gi|115 GCGCAAGTACCCACGTAAAGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATG
> 1310 1320 1330 1340 1350 1360
> 1340 1330 1320 1310 1300 1290
> gi|78- GGCTACACCTTGACCTAACGTCTTTACGTGGGTACTTGCGCTTACTTTGTAGCCTTCATC
> ::::::: ::
> gi|115 GGCTACATTTTCTACCCCAGAAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGT
> 1370 1380 1390 1400 1410 1420
>
> 16570 residues in 1 query sequences
> 16569 residues in 1 library sequences
> Scomplib [35.04]
> start: Sat Jan 24 07:06:10 2009 done: Sat Jan 24 07:06:14 2009
> Total Scan time: 3.420 Total Display time: 0.040
> Function used was FASTA [version 35.04 Aug. 28, 2008]
>
>
> ___________________________________________________________________
>
> Wen-Zhi WANG
>
> State Key Laboratory of Genetic Resources and Evolution
> Kunming Institute of Zoology, Chinese Academy of Sciences
> Kunming, Yunnan 650223 P. R. China
> Tel: (86) 871-5198993
> Fax: (86) 871-5195430
> Mobile: 13759114244
> E-mail: wenzhiwang1983 at yahoo.com.cn
>
>
> ___________________________________________________________
> 好玩贺卡等你发，邮箱贺卡全新上线！
> http://card.mail.cn.yahoo.com/
> <AC_000021.fas><DQ272107.fas><test.fasta>
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