[Bioperl-l] About to tag the last RC...

Dave Messina David.Messina at sbc.su.se
Wed Jan 14 09:53:00 UTC 2009


Test report on trunk r15372, perl 5.8.8, CentOS 5.2, install all optional
modules, install all scripts, do network tests.

All passed -- just saw two minor warnings, one from Bio::DB::Registry and
the same svggraph one as before.

Dave




t/LocalDB/Registry.............................1/14
--------------------- WARNING ---------------------
MSG: Couldn't call new_from_registry() on [Bio::DB::Flat]

------------- EXCEPTION: Bio::Root::Exception -------------
MSG: you must specify an indexing scheme
STACK: Error::throw
STACK: Bio::Root::Root::throw Bio/Root/Root.pm:357
STACK: Bio::DB::Flat::new Bio/DB/Flat.pm:160
STACK: Bio::DB::Flat::new_from_registry Bio/DB/Flat.pm:252
STACK: Bio::DB::Registry::_load_registry Bio/DB/Registry.pm:164
STACK: Bio::DB::Registry::new Bio/DB/Registry.pm:95
STACK: t/LocalDB/Registry.t:51
-----------------------------------------------------------

---------------------------------------------------
t/LocalDB/Registry.............................ok



t/Tree/TreeIO/svggraph.........................1/4 Use of uninitialized
value in join or string at /afs/
pdc.kth.se/home/d/dmessina/lib/perl5/site_perl/5.8.8/SVG/Element.pm line
1195, <GEN0> line 1.
t/Tree/TreeIO/svggraph.........................ok



All tests successful.
Files=322, Tests=20356, 545 wallclock secs ( 5.25 usr  0.87 sys + 173.39
cusr 26.97 csys = 206.48 CPU)
Result: PASS



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