[Bioperl-l] Bio::Seq::SeqWithQuality status

Florent Angly florent.angly at gmail.com
Tue Jan 13 19:37:12 UTC 2009

There is a line in the Bio::Seq::SeqWithQuality code that causes this 
module to display a warning mentioning that the module is deprecated:

l. 231:    $self->deprecated("deprecated class - use Bio::Seq::Quality 

I just updated the documentation so that is is clearer to everyone 
(incl. me).


Chris Fields wrote:
> What is the current status of this module?  Florent Angly has marked 
> this as deprecated on main trunk (in the POD) but it hasn't been added 
> to the DEPRECATED list, nor can I find any discussion on the mail list 
> about deprecating this module (normally a prerequisite for doing so).
> chris

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