[Bioperl-l] Call to users/developers -- user cases that bring Bioperl to its knees

Albert Vilella avilella at gmail.com
Thu Feb 26 09:07:36 UTC 2009


Hi Charles,

I found a split that could be turned into a unpack and should speed up
things a little bit. Yet the majority of potential speed ups will come
from avoiding _rearrange calls with a new_fast method call, but that
will have to wait for a while.

On Wed, Feb 25, 2009 at 2:06 PM, Charles Plessy
<charles-listes+bioperl at plessy.org> wrote:
> Le Wed, Feb 25, 2009 at 02:00:07PM +0000, Albert Vilella a écrit :
>>
>> Any parameters in particular for the script?
>
> Hi, I used either --from fastq --to fasta, or --from fastq --to raw.
>
> Have a nice day,
>
> --
> Charles
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