[Bioperl-l] [ANNOUNCEMENT] Release 1.6 of BioPerl-run, BioPerl-db, BioPerl-network

[Heikki Lehvaslaiho]

Awesome!

Thanks, Chris.

    -Heikki


2009/2/25 Chris Fields <cjfields1 at gmail.com>:
> All,
>
> I am proud to announce that the 1.6 release for BioPerl-run, BioPerl-db, and
> BioPerl-network are now available by direct download and via CPAN.  These
> are designated as 1.006000, with a requirement for BioPerl 1.6 and higher
> (1.006000).
>
> FIXED:
>
> 1) Bio::Tools::Run::Primer3 now accepts primer3 or primer3_core as
> executable names
> 2) Bio::Tools::Run::Vista tests now pass if Vista.jar is installed.
> 3) bug fix in bioperl-network
>
> What remains for the 1.6 release series:
>
> * Documentation, Documentation, and Documentation.  I haven't had much time
> unfortunately to work on documentation, primarily for BUGS/INSTALL/README
> etc within db/run/network (the latter has been mainly updated by Brian O.)
>  I will attempt to update these for the next point release, tentatively
> scheduled for mid-April.
>
> NOTE (so there is no confusion): the BioPerl-run archive is designated as
> BioPerl-1.6.1.tar.gz.  This is due to a small off-by-one bug in the test
> suite that passed for me locally but fails if primer3 isn't installed.  This
> unfortunately required a reupload to PAUSE.  However, the minimal core
> version version required is still 1.006000.
>
> Related to the above, I will sort out the versioning issues for the next
> point release as we arrive closer to it.  If needed we can bump the point
> release up to 1.6.2 to bring everything in sync.
>
> Here they are!
>
> BioPerl-run:
>
> http://bioperl.org/DIST/BioPerl-run-1.6.1.tar.bz2
> http://bioperl.org/DIST/BioPerl-run-1.6.1.tar.gz
> http://bioperl.org/DIST/BioPerl-run-1.6.1.zip
>
> BioPerl-db:
>
> http://bioperl.org/DIST/BioPerl-db-1.6.0.tar.bz2
> http://bioperl.org/DIST/BioPerl-db-1.6.0.tar.gz
> http://bioperl.org/DIST/BioPerl-db-1.6.0.zip
>
> BioPerl-network:
>
> http://bioperl.org/DIST/BioPerl-network-1.6.0.tar.bz2
> http://bioperl.org/DIST/BioPerl-network-1.6.0.tar.gz
> http://bioperl.org/DIST/BioPerl-network-1.6.0.zip
>
> SIGNATURES:
>
> http://bioperl.org/DIST/SIGNATURES.md5
>
> Cheers!
>
> chris
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>



-- 
    -Heikki
Heikki Lehvaslaiho - heikki lehvaslaiho gmail com
Sent from: Cape Town Western Cape South Africa.