[Bioperl-l] I don't get the plain sequence
manni122
markus.liebscher at gmx.de
Thu Feb 19 17:15:37 UTC 2009
Hi, maybe I am somehow unable to display the plain sequence from a
Bio::AlignIO object.
I put 2 aligned sequences in an array
while (my $aln = $input->next_aln()) {
push @nuc_seqs, $aln;
$seq1 = $aln->get_seq_by_pos(1);
$seq2 = $aln->get_seq_by_pos(2);
}
How do I get to know the sequences stored in the variables. I couldn't find
a hint. Thanks for help...
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