[Bioperl-l] Need help installing Bioperl on Windows
Corbo, Joseph
jcorbo at pathology.wustl.edu
Thu Oct 23 20:47:19 UTC 2008
Greetings. I am trying to install Bioperl on my Windows XP machine and
am having a problem I would greatly appreciate some help with. I am
following the directions for installing Bioperl as given on the Bioperl
website page "Installing Bioperl on Windows" under the section
"Installation using the Perl Package Manager". I added the three new
repositories (http://bioperl.org/DIST/ etc.) as they instruct. Then
when I try to install Bioperl either using the GUI installation or the
command line sequence "ppm-shell, search bioperl, install [number]" I
get the following error message which I don't know how to fix:
WARNING: Can't find any package that provides DB_File:: for
Bundle-BioPerl-Core
bioperl depends on Bundle-BioPerl-Core
bioperl depends on SVG
bioperl depends on GD-SVG
bioperl depends on Spreadsheet-ParseExcel
bioperl depends on XML-SAX
bioperl depends on AcePerl
bioperl depends on XML-SAX-ExpatXS
bioperl depends on SOAP-Lite
bioperl depends on SVG-Graph
bioperl depends on Bio-ASN1-EntrezGene
bioperl depends on XML-XPath
bioperl depends on Convert-Binary-C
bioperl depends on XML-Twig
bioperl depends on Set-Scalar
bioperl depends on Text-Shellwords
bioperl depends on Data-Stag
bioperl depends on libxml-perl
bioperl depends on XML-Writer
bioperl depends on Graph
bioperl depends on Class-AutoClass
bioperl depends on Clone
bioperl depends on XML-DOM-XPath
bioperl depends on IO-stringy
bioperl depends on OLE-Storage_Lite
bioperl depends on XML-NamespaceSupport
bioperl depends on Cache-Cache
bioperl depends on MIME-Lite
bioperl depends on Math-Derivative
bioperl depends on Math-Spline
bioperl depends on Statistics-Descriptive
bioperl depends on Tree-DAG_Node
bioperl depends on Heap
bioperl depends on Test-Deep
bioperl depends on XML-DOM
bioperl depends on XML-XPathEngine
bioperl depends on Error
bioperl depends on Email-Date-Format
bioperl depends on MIME-Types
bioperl depends on MailTools
bioperl depends on Test-Tester
bioperl depends on Test-NoWarnings
bioperl depends on XML-RegExp
bioperl depends on Test-Pod
bioperl depends on TimeDate
Any thoughts on how to fix this? Thanks, Joe Corbo
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