[Bioperl-l] xyplot howto?
Vesselin Baev
vebaev at gmail.com
Sun Oct 12 20:44:39 UTC 2008
Dear All,
I have a file containing methylation profile in GFF format such:
Chr1 ATIDB mCIP_col_BU_UB_methylation 1 24 1.5240512e-01 . . Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1 ATIDB mCIP_col_BU_UB_methylation 25 59 1.4491698e-01 . . Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1 ATIDB mCIP_col_BU_UB_methylation 60 112 8.0595555e-02 . . Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1 ATIDB mCIP_col_BU_UB_methylation 113 153 6.0091032e-02 . . Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1 ATIDB mCIP_col_BU_UB_methylation 154 184 4.9909350e-02 . . Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1 ATIDB mCIP_col_BU_UB_methylation 185 218 5.7258270e-01 . . Name="methylation
Chr1:mCIP_col_BU_UB"
Chr1 ATIDB mCIP_col_BU_UB_methylation 219 253 6.7766268e-01 . . Name="methylation
Chr1:mCIP_col_BU_UB"
what type of code to apply to display just an image-histogram for a
desired region (3 and 4 columns coordinates)?
Vesko
--
------------------------------------------------
Dr. Vesselin Baev
Research Assistant Professor
University of Plovdiv
Dept. Molecular Biology
Bioinformatics Group
Tzar Assen 24
Plovdiv 4000, BULGARIA
+359 32 261 (560)
+359 89 43 80 945
Skype: vebaev
vebaev at gmail.com
baev at uni-plovdiv.bg
http://plantgene.eu/
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