[Bioperl-l] finding sequence 2000 bp upstream in bioperl?

RICHARD GREEN greener at u.washington.edu
Wed Jul 2 18:10:20 UTC 2008

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Howdy Bioperlers,

Quick question, I have scripts that pull out a sequence from genbank, but I am looking for a command that would extract 2000 base pairs upstream of the sequence. Is there a way to extract just the Gene promoter region from genbank? Any advice that folks can give me a is muchly appreciated.

Thanks again

-Rich Green

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