[Bioperl-l] Using BLAT in BioPerl

[oso]

Error Message:
MSG: Blat call (blat
/var/folders/zK/zKXnWXt8G8epLqENEIdNkE+++TI/-Tmp-/wcjQruYe8A
/var/folders/zK/zKXnWXt8G8epLqENEIdNkE+++TI/-Tmp-/nePTpfPSKu -out=psl )
crashed: 65280 

STACK Bio::Tools::Run::Alignment::Blat::_run
/Library/Perl/5.8.8/Bio/Tools/Run/Alignment/Blat.pm:250
STACK Bio::Tools::Run::Alignment::Blat::run
/Library/Perl/5.8.8/Bio/Tools/Run/Alignment/Blat.pm:167
STACK main::get_orfs /Users/blatSearch.pl:50
STACK toplevel /Users/blatSearch.pl:29

*******
I am running BioPerl version 1.5.2.

Thanks for our help!




Dave Messina-3 wrote:
> 
> Hi,
> 
> Could you show us the error message you're seeing?
> 
> Also, what version of BioPerl are you running?
> 
> 
> Dave
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 
> 

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