[Bioperl-l] Species name problems with bioperl-db
Sendu Bala
bix at sendu.me.uk
Fri Jan 26 18:27:03 UTC 2007
Roy Chaudhuri wrote:
> Hi.
[snip]
> It is easy to see why problems are arising- the species name used in the
> GenBank/Uniprot entry is sometimes a synonym of that in the supplied
> lineage, rather than an exact duplicate. Is the check on line 167 really
> necessary? Or at least could the throw be changed to a warn?
I acknowledge this report (thank you for the details) and will
investigate when I have the time. I must have had some good reason for
the check throwing, but will confirm if has to be done that way.
If you could, please make a new bug report on bugzilla for this.
Cheers,
Sendu.
More information about the Bioperl-l
mailing list