[Bioperl-l] bioperl-network-1.5.2_100 node IDs
Mikel Egaña Aranguren
mikel.eganaaranguren at cs.man.ac.uk
Sun Jan 21 16:52:53 UTC 2007
Hello;
is there a way of fine-tuning the types of ids that are stored in the
Node objects, in the Bio::Network module?
For example, if I have the following in an Intact psi xml file:
<primaryRef db="uniprotkb" id="Q9Y738"
secondary="mis12_schpo" version="SP_37"/>
<secondaryRef db="interpro" id="IPR008685" secondary="Mis12"/>
<secondaryRef db="intact" id="EBI-1002822"
secondary="mis12_schpo"/>
How can I retrieve the id "mis12_schpo"? At the moment it just gives me
"Q9Y738".
Thanks a lot.
Regards
--
Mikel Egaña Aranguren - http://www.mikeleganaaranguren.com
PhD student - Manchester University Computer Science
Cell Cycle Ontology
http://www.cellcycleontology.org
Gene Ontology Next Generation
http://www.gong.manchester.ac.uk
Metabolik BioHacklab
http://www.sindominio.net/metabolik/weblog
X-Evian
http://x-evian.org/
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