[Bioperl-l] DNA sequence assembly for SNP analysis
cjfields at uiuc.edu
Sun Sep 17 14:00:34 UTC 2006
Bioperl has some SNP tools but I'm not sure how up-to-date they are.
Most of those are accessible via Bio::Cluster, Bio::ClusterIO, and
On Sep 17, 2006, at 8:06 AM, Fausto Rodríguez Zapata wrote:
> I've found some people that had made po perl scripts for extracting
> from CAP3 ACE assembly files:
> --- Thomas J Keller <kellert at ohsu.edu> wrote:
>> What are people using for DNA sequence assembly for SNP analysis
>> these days?
>> Tom K
>> Thomas J. Keller, Ph.D.
>> Director, MMI Core Facility
>> Oregon Health & Science University
>> 3181 SW Sam Jackson Park Rd.
>> Portland, OR, USA, 97239
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
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